myRT

myRT report for GCA_009830025.1_ASM983002v1

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Seq: SZZZ01000046.1 Pantoea sp. Taur Taurocerus_sp_symbiont_contig46, whole genome shotgun sequence (7455 bp)
Overview 1 RT 1: 112-7453 bp Neighborhood of RT #1 [112, 7452] L1-EN RVT-UNC R1-I-EN RVT-CRISPR-like MetA Feature: gene Location: 112-3279 bp Feature: domain Description: L1-EN Location: 286-1030 bp Feature: domain Description: L1 -EN Location: 286-1 030 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1888-2527 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 888-2527 bp Feature: gene Location: 3574-6258 bp Feature: domain Description: R1-I-EN Location: 3598-4225 bp Feature: domain Description: R1 -I-EN Location: 3598-4225 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5095-5671 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5095-5671 bp Feature: gene Location: 6435-6746 bp Feature: gene Location: 7147-7452 bp Feature: domain Description: MetA Location: 7276-7453 bp Feature: domain Description: MetA Location: 7276-7453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), R1-I-EN (cd09077), RVT-CRISPR, MetA (COG1897)

Seq: SZZZ01000047.1 Pantoea sp. Taur Taurocerus_sp_symbiont_contig47, whole genome shotgun sequence (7392 bp)
Overview 1 RT 1: 2-7390 bp Neighborhood of RT #1 [2, 7389] RVT-UNC R1-I-EN RVT-GII Rnase_HI_RT_non_LTR KOG0237 Feature: gene Location: 2-823 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 146-797 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 146-797 bp Feature: gene Location: 898-2136 bp Feature: gene Location: 2340-5930 bp Feature: domain Description: R1-I-EN Location: 2367-2913 bp Feature: domain Description: R1-I-EN Location: 2 367-2 913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3768-4386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3768-4386 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 5130-5490 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 5130-5490 bp Feature: gene Location: 6444-6764 bp Feature: gene Location: 7261-7389 bp Feature: domain Description: KOG0237 Location: 7270-7390 bp Feature: domain Description: KOG02 37 Location: 72 70-7390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-DGRs/RVT-UG19/RVT-GII(RVT-UNC), R1-I-EN (cd09077), RVT-GII, Rnase_HI_RT_non_LTR (cd09276), KOG0237 (KOG0237, Glycinamide ribonucleotide synthetase (GARS)/Aminoimidazole ribonucleotide synthetase (AIRS) )

Seq: SZZZ01000050.1 Pantoea sp. Taur Taurocerus_sp_symbiont_contig50, whole genome shotgun sequence (4462 bp)
Overview 1 RT 1: 658-4460 bp Neighborhood of RT #1 [658, 4460] L1-EN RVT-CRISPR-like Feature: gene Location: 658-3492 bp Feature: domain Description: L1-EN Location: 661-1303 bp Feature: domain Description: L1-EN Location: 661-13 03 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2194-2818 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2194-2818 bp Feature: gene Location: 4254-4460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: SZZZ01000054.1 Pantoea sp. Taur Taurocerus_sp_symbiont_contig54, whole genome shotgun sequence (2429 bp)
Overview 1 RT 1: 489-1703 bp Neighborhood of RT #1 [489, 2341] RVT-CRISPR-like Feature: gene Location: 489-659 bp Feature: gene Location: 671-2341 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1181-1703 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1181-1703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR