myRT

myRT report for GCA_009836365.1_ASM983636v1

Download annotations/find similar RTs

Seq: VXVP01000023.1 Boseongicola sp. SB0667_bin_21 NODE_2580_length_7825_cov_5.109524, whole genome shotgun sequence (7825 bp)
Overview 1 RT 1: 2-1470 bp Neighborhood of RT #1 [2, 1502] RVT-GII GIIM COG4120 COG4120 Feature: gene Location: 2-757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-362 bp Feature: domain Description: GIIM Note: maturase Location: 434-650 bp Feature: domain Description: GIIM Note: maturase Location: 434-650 bp Feature: gene Location: 502-1239 bp Feature: domain Description: COG4120 Location: 910-1135 bp Feature: domain Description: COG41 20 Location: 91 0-1 1 35 bp Feature: gene Location: 1242-1502 bp Feature: domain Description: COG4120 Location: 1245-1470 bp Feature: domain Description: COG41 20 Location: 1 245-1 470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4120 (ABC-type uncharacterized transport system, permease component ), RVT-GII, GIIM (pfam08388)

Seq: VXVP01000624.1 Boseongicola sp. SB0667_bin_21 NODE_3490_length_6191_cov_4.766623, whole genome shotgun sequence (6191 bp)
Overview 1 RT 1: 93-4211 bp Neighborhood of RT #1 [93, 4231] Ser_Recombinase RVT-GII COG3177 PinE Feature: gene Location: 93-614 bp Feature: domain Description: Ser_Recombinase Location: 150-510 bp Feature: domain Description: Ser_Recombinase Location: 150-510 bp Feature: gene Location: 656-1111 bp Feature: gene Location: 1156-1557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1159-1537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1159-1537 bp Feature: gene Location: 1929-3479 bp Feature: domain Description: COG3177 Location: 2580-3057 bp Feature: domain Description: COG3177 Location: 2 580-3057 bp Feature: gene Location: 4034-4231 bp Feature: domain Description: PinE Location: 4040-4211 bp Feature: domain Description: PinE Location: 4040-42 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3177 (Fic family protein ), PinE (COG1961), Ser_Recombinase (cl02788)