myRT

myRT report for GCA_009837625.1_ASM983762v1

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Seq: VXTF01000708.1 Candidatus Poribacteria bacterium isolate SB0665_bin_33 NODE_11338_length_2611_cov_5.284429, whole genome shotgun sequence (2611 bp)
Overview 1 RT 1: 135-2470 bp Neighborhood of RT #1 [135, 2470] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 135-1952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1 236 bp Feature: domain Description: Intron_maturas2 Location: 1320-1557 bp Feature: domain Description: Intron_maturas2 Location: 1 320-1 557 bp Feature: domain Description: HNHc Note: nucleases Location: 1722-1908 bp Feature: domain Description: HNHc Note: nucleases Location: 1 722-1 908 bp Feature: gene Location: 2261-2470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: VXTF01000108.1 Candidatus Poribacteria bacterium isolate SB0665_bin_33 NODE_4505_length_6323_cov_5.429164, whole genome shotgun sequence (6323 bp)
Overview 1 RT 1: 356-5726 bp Neighborhood of RT #1 [356, 5779] Cas1_I-II-III RVT-CRISPR GadA COG4715 COG4715 Feature: gene Location: 356-1348 bp Feature: domain Description: Cas1_I-II-III Location: 365-1310 bp Feature: domain Description: Cas1_I-II-III Location: 365-1310 bp Feature: gene Location: 1442-1648 bp Feature: gene Location: 1657-2208 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1915-2113 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1915-2 113 bp Feature: gene Location: 2685-4322 bp Feature: domain Description: GadA Location: 2787-4053 bp Feature: domain Description: GadA Location: 2 787-4053 bp Feature: gene Location: 4331-5779 bp Feature: domain Description: COG4715 Location: 4361-4619 bp Feature: domain Description: COG4715 Location: 4361-4619 bp Feature: domain Description: COG4715 Location: 5372-5726 bp Feature: domain Description: COG4715 Location: 5372 -572 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), RVT-CRISPR, GadA (COG0076), COG4715 (Uncharacterized conserved protein, contains Zn finger domain )