myRT

myRT report for GCA_009838215.1_ASM983821v1

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Seq: VXSA01000100.1 Rhodospirillaceae bacterium isolate SB0664_bin_5 NODE_2415_length_12695_cov_71.576266, whole genome shotgun sequence (12695 bp)
Overview 1 RT 1: 749-6195 bp Neighborhood of RT #1 [749, 6269] ssb TraU RVT-GII GIIM TrbC_Ftype PRK12355 Feature: gene Location: 749-1138 bp Feature: domain Description: ssb Location: 758-1100 bp Feature: domain Description: ssb Location: 758-1 1 00 bp Feature: gene Location: 1135-2142 bp Feature: domain Description: TraU Location: 1222-2134 bp Feature: domain Description: TraU Location: 1 222-21 34 bp Feature: gene Location: 2748-4268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057-3804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057-3804 bp Feature: domain Description: GIIM Note: maturase Location: 3882-4107 bp Feature: domain Description: GIIM Note: maturase Location: 3882-41 07 bp Feature: gene Location: 4399-5148 bp Feature: domain Description: TrbC_Ftype Location: 4741-5131 bp Feature: domain Description: TrbC_Ftype Location: 4741 -51 31 bp Feature: gene Location: 5145-6269 bp Feature: domain Description: PRK12355 Location: 5652-6195 bp Feature: domain Description: PRK1 2355 Location: 5652-61 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraU (pfam06834), RVT-GII, GIIM (pfam08388), TrbC_Ftype (TIGR02742), PRK12355 (type-F conjugative transfer system mating-pair stabilization protein TraN), ssb (TIGR00621)

Seq: VXSA01000078.1 Rhodospirillaceae bacterium isolate SB0664_bin_5 NODE_2487_length_12342_cov_81.519248, whole genome shotgun sequence (12342 bp)
Overview 1 RT 1: 1592-7203 bp Neighborhood of RT #1 [1592, 7292] YAcAr RVT-GII GIIM COG3177 Feature: gene Location: 1592-2518 bp Feature: domain Description: YAcAr Location: 2186-2378 bp Feature: domain Description: YAcAr Location: 2 186-2 378 bp Feature: gene Location: 3459-3629 bp Feature: gene Location: 3684-5171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4131-4791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4131-4791 bp Feature: domain Description: GIIM Note: maturase Location: 4863-5067 bp Feature: domain Description: GIIM Note: maturase Location: 4863-5067 bp Feature: gene Location: 5554-5940 bp Feature: gene Location: 6093-7292 bp Feature: domain Description: COG3177 Location: 6165-7203 bp Feature: domain Description: COG3177 Location: 6165-72 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YAcAr, RVT-GII, GIIM (pfam08388), COG3177 (Fic family protein )

Seq: VXSA01000104.1 Rhodospirillaceae bacterium isolate SB0664_bin_5 NODE_571_length_50787_cov_54.820271, whole genome shotgun sequence (50787 bp)
Overview 1 RT 1: 45227-50237 bp Neighborhood of RT #1 [45227, 50284] RVT-GII GIIM PRK06341 PRK07078 Toprim_3 Feature: gene Location: 45227-45682 bp Feature: gene Location: 45673-46203 bp Feature: gene Location: 46468-47670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46564-47260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46564-47260 bp Feature: domain Description: GIIM Note: maturase Location: 47329-47542 bp Feature: domain Description: GIIM Note: maturase Location: 473 29-47542 bp Feature: gene Location: 48600-49058 bp Feature: domain Description: PRK06341 Location: 48612-49020 bp Feature: domain Description: PRK063 41 Location: 48612-49020 bp Feature: gene Location: 49256-50284 bp Feature: domain Description: PRK07078 Location: 49283-49508 bp Feature: domain Description: PRK07078 Location: 49283 -49508 bp Feature: domain Description: Toprim_3 Location: 49970-50237 bp Feature: domain Description: Toprim_3 Location: 49970-5023 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK06341 (single-stranded DNA-binding protein; Provisional), PRK07078 (hypothetical protein; Validated), Toprim_3 (pfam13362)