myRT

myRT report for GCA_009841825.1_ASM984182v1

Download annotations/find similar RTs

Seq: VYGM01000295.1 Gemmatimonadetes bacterium isolate SB0678_bin_23 NODE_502_length_23512_cov_17.077376, whole genome shotgun sequence (23512 bp)
Overview 1 RT 1: 19021-23511 bp Neighborhood of RT #1 [19021, 23511] PHA02517 HTH_28 RVT-GII GIIM Feature: gene Location: 19021-19740 bp Feature: domain Description: PHA02517 Location: 19078-19723 bp Feature: domain Description: PHA0251 7 Location: 1 9078-1 9723 bp Feature: gene Location: 19909-20271 bp Feature: domain Description: HTH_28 Location: 19993-20143 bp Feature: domain Description: HTH_28 Location: 1 9993-201 43 bp Feature: gene Location: 20479-21819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20779-21439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20779-21 439 bp Feature: domain Description: GIIM Note: maturase Location: 21511-21718 bp Feature: domain Description: GIIM Note: maturase Location: 21 51 1 -21 71 8 bp Feature: gene Location: 23023-23511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), HTH_28 (pfam13518), RVT-GII, GIIM (pfam08388)

Seq: VYGM01000123.1 Gemmatimonadetes bacterium isolate SB0678_bin_23 NODE_6232_length_4345_cov_11.366434, whole genome shotgun sequence (4345 bp)
Overview 1 RT 1: 408-3733 bp Neighborhood of RT #1 [408, 4344] COG5421 RVT-UG12 Feature: gene Location: 408-1034 bp Feature: domain Description: COG5421 Location: 417-756 bp Feature: domain Description: COG542 1 Location: 417-756 bp Feature: gene Location: 1308-1892 bp Feature: gene Location: 3007-4344 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 3277-3733 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 32 77-3733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-UG12