myRT

myRT report for GCA_009841885.1_ASM984188v1

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Seq: VYGK01000296.1 Acidimicrobiia bacterium isolate SB0678_bin_21 NODE_10735_length_2853_cov_4.822016, whole genome shotgun sequence (2853 bp)
Overview 1 RT 1: 3-2763 bp Neighborhood of RT #1 [3, 2786] RadC KOG4768 RVT-GII Intron_maturas2 PRK00024 Feature: gene Location: 3-272 bp Feature: domain Description: RadC Location: 12-264 bp Feature: domain Description: RadC Location: 1 2-264 bp Feature: gene Location: 352-540 bp Feature: domain Description: KOG4768 Location: 355-499 bp Feature: domain Description: KOG4768 Location: 355-499 bp Feature: gene Location: 634-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 652-1447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 652-1 447 bp Feature: domain Description: Intron_maturas2 Location: 1549-1783 bp Feature: domain Description: Intron_maturas2 Location: 1 549-1 783 bp Feature: gene Location: 2278-2439 bp Feature: gene Location: 2541-2786 bp Feature: domain Description: PRK00024 Location: 2589-2763 bp Feature: domain Description: PRK00024 Location: 2589-2763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RadC (pfam04002), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348)

Seq: VYGK01000331.1 Acidimicrobiia bacterium isolate SB0678_bin_21 NODE_9035_length_3275_cov_10.359627, whole genome shotgun sequence (3275 bp)
Overview 1 RT 1: 3-3104 bp Neighborhood of RT #1 [3, 3104] HTH_XRE HsdM_N N6_Mtase RVT-GII Feature: gene Location: 3-899 bp Feature: domain Description: HTH_XRE Location: 33-168 bp Feature: domain Description: HTH_XRE Location: 33-168 bp Feature: domain Description: HsdM_N Location: 294-741 bp Feature: domain Description: HsdM_N Location: 2 94-741 bp Feature: domain Description: N6_Mtase Location: 783-897 bp Feature: domain Description: N6_Mtase Location: 783-897 bp Feature: gene Location: 1069-2544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1477-2173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1477-2 173 bp Feature: gene Location: 2889-3104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_XRE (smart00530), HsdM_N (pfam12161), N6_Mtase (pfam02384)