myRT

myRT report for GCA_009843225.1_ASM984322v1

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Seq: VYDV01000063.1 Gammaproteobacteria bacterium isolate SB0676_bin_17 NODE_1630_length_14278_cov_11.775153, whole genome shotgun sequence (14278 bp)
Overview 1 RT 1: 8583-11552 bp Neighborhood of RT #1 [8583, 14203] RVT-UG1 Feature: gene Location: 8583-9218 bp Feature: gene Location: 9382-10395 bp Feature: gene Location: 10781-14203 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11069-11552 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 1 069-1 1 552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1

Seq: VYDV01000067.1 Gammaproteobacteria bacterium isolate SB0676_bin_17 NODE_6592_length_5225_cov_6.871954, whole genome shotgun sequence (5225 bp)
Overview 1 RT 1: 1-5218 bp Neighborhood of RT #1 [1, 5223] HTH_32 rve RVT-GII GIIM Porin_4 Arm-DNA-bind_3 XerC Feature: gene Location: 1-1044 bp Feature: domain Description: HTH_32 Location: 4-178 bp Feature: domain Description: HTH_32 Location: 4-178 bp Feature: domain Description: rve Location: 295-658 bp Feature: domain Description: rve Location: 2 95-658 bp Feature: gene Location: 1280-2569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1520-2138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 0-2 138 bp Feature: domain Description: GIIM Note: maturase Location: 2189-2417 bp Feature: domain Description: GIIM Note: maturase Location: 2 189-2 417 bp Feature: gene Location: 3136-4206 bp Feature: domain Description: Porin_4 Location: 3172-4129 bp Feature: domain Description: Porin_4 Location: 3172 -412 9 bp Feature: gene Location: 4366-5223 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4483-4753 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4483-4753 bp Feature: domain Description: XerC Location: 4801-5218 bp Feature: domain Description: XerC Location: 4801-52 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), RVT-GII, GIIM (pfam08388), Porin_4 (pfam13609), Arm-DNA-bind_3 (pfam13356), XerC (COG4973)

Seq: VYDV01000193.1 Gammaproteobacteria bacterium isolate SB0676_bin_17 NODE_8252_length_4412_cov_5.019738, whole genome shotgun sequence (4412 bp)
Overview 1 RT 1: 1-4409 bp Neighborhood of RT #1 [1, 4409] AAA_33 PDDEXK_1 RVT-UG13 Feature: gene Location: 1-1215 bp Feature: domain Description: AAA_33 Location: 25-385 bp Feature: domain Description: AAA_3 3 Location: 25-3 85 bp Feature: domain Description: PDDEXK_1 Location: 529-1213 bp Feature: domain Description: PDDEXK_1 Location: 529-1213 bp Feature: gene Location: 1225-2133 bp Feature: gene Location: 2133-3743 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 2502-2925 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 2502-2925 bp Feature: gene Location: 3853-4116 bp Feature: gene Location: 4119-4409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_33 (pfam13671), PDDEXK_1 (pfam12705), RVT-UG13