myRT

myRT report for GCA_009846545.2_ASM984654v2

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Seq: ML776503.1 Enterococcus faecium 6066 genomic scaffold scaffold2, whole genome shotgun sequence (427133 bp)
Overview 1 RT 1: 17870-20603 bp Neighborhood of RT #1 [17870, 20722] ArdA RVT-GII HNHc Feature: gene Location: 17870-18367 bp Feature: domain Description: ArdA Location: 17888-18353 bp Feature: domain Description: ArdA Location: 1 7888-1 8353 bp Feature: gene Location: 18484-18651 bp Feature: gene Location: 18812-20722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19145-19883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 45-1 9883 bp Feature: domain Description: HNHc Note: nucleases Location: 20438-20603 bp Feature: domain Description: HNHc Note: nucleases Location: 20438-20603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507)

Seq: ML776505.1 Enterococcus faecium 6066 genomic scaffold scaffold4, whole genome shotgun sequence (531305 bp)
Overview 1 RT 1: 334054-339334 bp Neighborhood of RT #1 [334054, 340026] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 334054-335259 bp Feature: domain Description: Glucosaminidase Location: 334330-334726 bp Feature: domain Description: Glucosaminidase Location: 334330-33472 6 bp Feature: domain Description: Peptidase_M23 Location: 334903-335140 bp Feature: domain Description: Peptidase_M2 3 Location: 334903-335140 bp Feature: gene Location: 335259-335579 bp Feature: gene Location: 335767-337644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336082-336820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336082 -33682 0 bp Feature: domain Description: HNHc Note: nucleases Location: 337378-337531 bp Feature: domain Description: HNHc Note: nucleases Location: 337378-337531 bp Feature: gene Location: 337831-338064 bp Feature: gene Location: 338332-340026 bp Feature: domain Description: VirB4 Location: 338650-339334 bp Feature: domain Description: VirB4 Location: 338650-339334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: ML776509.1 Enterococcus faecium 6066 genomic scaffold scaffold8, whole genome shotgun sequence (124978 bp)
Overview 1 RT 1: 61739-64716 bp Neighborhood of RT #1 [61739, 64748] RVT-AbiP2 HsdM Feature: gene Location: 61739-63127 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 62000-62465 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 62000-62465 bp Feature: gene Location: 63465-64748 bp Feature: domain Description: HsdM Location: 63486-64716 bp Feature: domain Description: HsdM Location: 63 486-64716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)