myRT

myRT report for GCA_009846615.2_ASM984661v2

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Seq: ML956084.1 Enterococcus faecium 17282 genomic scaffold scaffold5, whole genome shotgun sequence (270703 bp)
Overview 1 RT 1: 118603-130988 bp 2 RT 2: 141032-145402 bp Neighborhood of RT #1 [118603, 130988] TpcC RVT-GII HNHc Lysozyme_like Spr AAA_10 RVT-GII HNHc Neighborhood of RT #2 [141032, 145410] FtsK HNHc RVT-GII FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 118603-118806 bp Feature: gene Location: 119238-120149 bp Feature: domain Description: TpcC Location: 119469-120135 bp Feature: domain Description: TpcC Location: 1 1 9469-1 201 35 bp Feature: gene Location: 120326-122155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120641-121340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20641 -1 21 340 bp Feature: domain Description: HNHc Note: nucleases Location: 121865-122030 bp Feature: domain Description: HNHc Note: nucleases Location: 1 21 865-1 22030 bp Feature: gene Location: 122869-123819 bp Feature: domain Description: Lysozyme_like Location: 123016-123478 bp Feature: domain Description: Lysozyme_like Location: 1 2301 6-1 23478 bp Feature: domain Description: Spr Location: 123505-123802 bp Feature: domain Description: Spr Location: 1 23505-1 23802 bp Feature: gene Location: 123816-125924 bp Feature: gene Location: 125929-127209 bp Feature: domain Description: AAA_10 Location: 126091-127174 bp Feature: domain Description: AAA_1 0 Location: 1 26091 -1 271 74 bp Feature: gene Location: 127249-129051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127546-128245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27546-1 28245 bp Feature: domain Description: HNHc Note: nucleases Location: 128800-128938 bp Feature: domain Description: HNHc Note: nucleases Location: 1 28800-1 28938 bp Feature: gene Location: 129577-129726 bp Feature: gene Location: 129729-130988 bp Feature: gene Location: 141032-141412 bp Feature: domain Description: FtsK Location: 141047-141287 bp Feature: domain Description: FtsK Location: 1 41 047-1 41 287 bp Feature: gene Location: 141514-142113 bp Feature: domain Description: HNHc Note: nucleases Location: 141835-142000 bp Feature: domain Description: HNHc Note: nucleases Location: 1 41 835-1 42000 bp Feature: gene Location: 142125-143387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142491-143187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42491 -1 431 87 bp Feature: gene Location: 143981-145012 bp Feature: domain Description: FtsK_SpoIIIE Location: 144653-144893 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 44653-1 44893 bp Feature: gene Location: 145066-145410 bp Feature: domain Description: RelB_DinJ Location: 145276-145402 bp Feature: domain Description: RelB_DinJ Location: 1 45276-1 45402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TpcC (pfam12642), RVT-GII, HNHc (smart00507), Lysozyme_like (pfam13702), Spr (COG0791), AAA_10 (pfam12846), FtsK (COG1674), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: ML956090.1 Enterococcus faecium 17282 genomic scaffold scaffold11, whole genome shotgun sequence (101724 bp)
Overview 1 RT 1: 61201-65642 bp Neighborhood of RT #1 [61201, 65785] RVT-AbiP2 HsdM Rep_2 Feature: gene Location: 61201-62589 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 61462-61927 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 61462 -6192 7 bp Feature: gene Location: 63964-64119 bp Feature: gene Location: 62927-65785 bp Feature: domain Description: HsdM Location: 62948-64178 bp Feature: domain Description: HsdM Location: 62 948-64178 bp Feature: domain Description: Rep_2 Location: 65075-65642 bp Feature: domain Description: Rep_2 Location: 65075-65642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rep_2 (pfam01719)

Seq: ML956093.1 Enterococcus faecium 17282 genomic scaffold scaffold14, whole genome shotgun sequence (56182 bp)
Overview 1 RT 1: 52572-55799 bp Neighborhood of RT #1 [52572, 55799] MazE RVT-GII HNHc Feature: gene Location: 52572-52835 bp Feature: domain Description: MazE Location: 52593-52830 bp Feature: domain Description: MazE Location: 52593 -5283 0 bp Feature: gene Location: 52894-53214 bp Feature: gene Location: 53502-55379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53817-54555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 817-54555 bp Feature: domain Description: HNHc Note: nucleases Location: 55113-55266 bp Feature: domain Description: HNHc Note: nucleases Location: 55113 -55266 bp Feature: gene Location: 55566-55799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), RVT-GII, HNHc (smart00507)

Seq: ML956094.1 Enterococcus faecium 17282 genomic scaffold scaffold15, whole genome shotgun sequence (18855 bp)
Overview 1 RT 1: 3-7266 bp Neighborhood of RT #1 [3, 7266] TraG-D_C RVT-GII HNH_4 Feature: gene Location: 3-629 bp Feature: domain Description: TraG-D_C Location: 6-312 bp Feature: domain Description: TraG-D_C Location: 6-312 bp Feature: gene Location: 755-2671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094-1829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094 -1829 bp Feature: domain Description: HNH_4 Location: 2423-2528 bp Feature: domain Description: HNH_4 Location: 24 23-2528 bp Feature: gene Location: 4362-4604 bp Feature: gene Location: 5212-7266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, HNH_4 (pfam13395)