myRT

myRT report for GCA_009846845.1_ASM984684v1

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Seq: WUUO01000001.1 Erwinia rhapontici strain CGMCC1.6978 Scaffold1_1, whole genome shotgun sequence (1218293 bp)
Overview 1 RT 1: 864895-869261 bp Neighborhood of RT #1 [864895, 869261] P Q RVT-Retrons Feature: gene Location: 864895-865854 bp Feature: domain Description: P Location: 864967-865828 bp Feature: domain Description: P Location: 864967-865828 bp Feature: gene Location: 865854-866885 bp Feature: domain Description: Q Location: 865857-866880 bp Feature: domain Description: Q Location: 865857-866880 bp Feature: gene Location: 866911-868617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 867043-867688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 867043-867688 bp Feature: gene Location: 868844-869029 bp Feature: gene Location: 869037-869261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons

Seq: WUUO01000007.1 Erwinia rhapontici strain CGMCC1.6978 Scaffold7_1, whole genome shotgun sequence (260097 bp)
Overview 1 RT 1: 44144-50290 bp Neighborhood of RT #1 [44144, 50346] T4SS VirB4_CagE RVT-GII HNHc VirB3 VirB4_CagE Feature: gene Location: 44144-44851 bp Feature: domain Description: T4SS Location: 44210-44786 bp Feature: domain Description: T4SS Location: 442 10-44786 bp Feature: gene Location: 44872-45264 bp Feature: domain Description: VirB4_CagE Location: 44875-45253 bp Feature: domain Description: VirB4_CagE Location: 44875-452 53 bp Feature: gene Location: 45459-47396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45861-46563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45861-46563 bp Feature: domain Description: HNHc Note: nucleases Location: 47121-47286 bp Feature: domain Description: HNHc Note: nucleases Location: 4712 1-472 86 bp Feature: gene Location: 47504-47671 bp Feature: gene Location: 48001-50346 bp Feature: domain Description: VirB3 Location: 48010-48241 bp Feature: domain Description: VirB3 Location: 48010-482 41 bp Feature: domain Description: VirB4_CagE Location: 48328-50290 bp Feature: domain Description: VirB4_CagE Location: 4832 8-502 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS (pfam07996), VirB4_CagE (TIGR00929), RVT-GII, HNHc (smart00507), VirB3 (pfam05101)