myRT

myRT report for GCA_009848275.1_ASM984827v1

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Seq: WVGT01000032.1 Streptococcus equi subsp. zooepidemicus strain INFECT6047_SEZ NODE_32_length_22020_cov_49.5231, whole genome shotgun sequence (22020 bp)
Overview 1 RT 1: 11774-20255 bp Neighborhood of RT #1 [11774, 21001] N6_Mtase COG4646 RVT-GII KOG4768 KOG1000 Feature: gene Location: 11774-12118 bp Feature: gene Location: 12160-17244 bp Feature: domain Description: N6_Mtase Location: 13777-14368 bp Feature: domain Description: N6_Mtase Location: 1 3777-1 4368 bp Feature: domain Description: COG4646 Location: 14962-17089 bp Feature: domain Description: COG4646 Location: 1 4962-1 7089 bp Feature: gene Location: 17742-18692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18003-18687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8003-1 8687 bp Feature: gene Location: 18723-19520 bp Feature: domain Description: KOG4768 Location: 18732-19506 bp Feature: domain Description: KOG4768 Location: 1 8732-1 9506 bp Feature: gene Location: 19658-21001 bp Feature: domain Description: KOG1000 Location: 19937-20255 bp Feature: domain Description: KOG1 000 Location: 1 9937-20255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: WVGT01000038.1 Streptococcus equi subsp. zooepidemicus strain INFECT6047_SEZ NODE_38_length_17712_cov_42.1117, whole genome shotgun sequence (17712 bp)
Overview 1 RT 1: 1-2654 bp Neighborhood of RT #1 [1, 2713] RVT-GII Relaxase MobC Feature: gene Location: 1-1332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-1081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 77-1081 bp Feature: gene Location: 1869-2339 bp Feature: domain Description: Relaxase Location: 2034-2304 bp Feature: domain Description: Relaxase Location: 2 034-2 304 bp Feature: gene Location: 2345-2713 bp Feature: domain Description: MobC Location: 2531-2654 bp Feature: domain Description: MobC Location: 2 531-2 654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Relaxase (pfam03432), MobC (pfam05713)

Seq: WVGT01000055.1 Streptococcus equi subsp. zooepidemicus strain INFECT6047_SEZ NODE_55_length_2033_cov_102.587, whole genome shotgun sequence (2033 bp)
Overview 1 RT 1: 529-1861 bp Neighborhood of RT #1 [529, 2031] RVT_N RVT-GII GIIM Feature: gene Location: 529-2031 bp Feature: RT Description: RVT_N Location: 625-865 bp Feature: RT Description: RVT_N Location: 625-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913 -1573 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1861 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)