myRT

myRT report for GCA_009848325.1_ASM984832v1

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Seq: WVWA01000023.1 Escherichia coli strain WX288 NODE_23_length_82444_cov_109.964865, whole genome shotgun sequence (82444 bp)
Overview 1 RT 1: 76480-82300 bp Neighborhood of RT #1 [76480, 82317] Phage_int_SAM_5 INT_C_like_1 PRK09692 RVT-UG7 Psu Feature: gene Location: 76480-77844 bp Feature: domain Description: Phage_int_SAM_5 Location: 76879-77116 bp Feature: domain Description: Phage_int_SAM_5 Location: 76879-771 1 6 bp Feature: domain Description: INT_C_like_1 Location: 77212-77728 bp Feature: domain Description: INT_C_like_1 Location: 7721 2-77728 bp Feature: gene Location: 78083-79267 bp Feature: domain Description: PRK09692 Location: 78089-79244 bp Feature: domain Description: PRK09692 Location: 78089-79244 bp Feature: gene Location: 79260-80888 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 79668-80097 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 79668-80097 bp Feature: gene Location: 80885-81625 bp Feature: gene Location: 81928-82317 bp Feature: domain Description: Psu Location: 81931-82300 bp Feature: domain Description: Psu Location: 81 931 -82300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: WVWA01000051.1 Escherichia coli strain WX288 NODE_51_length_9990_cov_96.624836, whole genome shotgun sequence (9990 bp)
Overview 1 RT 1: 3661-7643 bp Neighborhood of RT #1 [3661, 7669] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 3661-4692 bp Feature: domain Description: Asparaginase_2 Location: 3751-4684 bp Feature: domain Description: Asparaginase_2 Location: 3751-4684 bp Feature: gene Location: 5019-5168 bp Feature: gene Location: 5216-5662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5522-5624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552 2 -562 4 bp Feature: gene Location: 5884-6255 bp Feature: gene Location: 6308-7669 bp Feature: domain Description: DcuC Location: 6311-7643 bp Feature: domain Description: DcuC Location: 6311-7643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)