myRT

myRT report for GCA_009848395.1_ASM984839v1

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Seq: WVWC01000029.1 Escherichia coli strain WX196 NODE_29_length_40804_cov_86.974857, whole genome shotgun sequence (40804 bp)
Overview 1 RT 1: 570-5849 bp Neighborhood of RT #1 [570, 5965] RVT-UG7 PRK09692 Phage_int_SAM_5 INT_C_like_1 Feature: gene Location: 570-710 bp Feature: gene Location: 820-1560 bp Feature: gene Location: 1557-3185 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1965-2394 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 965-2394 bp Feature: gene Location: 3178-4362 bp Feature: domain Description: PRK09692 Location: 3184-4339 bp Feature: domain Description: PRK09692 Location: 31 84-4339 bp Feature: gene Location: 4688-5965 bp Feature: domain Description: Phage_int_SAM_5 Location: 5000-5237 bp Feature: domain Description: Phage_int_SAM_5 Location: 5000-5237 bp Feature: domain Description: INT_C_like_1 Location: 5333-5849 bp Feature: domain Description: INT_C_like_1 Location: 5333-5849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184)

Seq: WVWC01000036.1 Escherichia coli strain WX196 NODE_36_length_28464_cov_93.740832, whole genome shotgun sequence (28464 bp)
Overview 1 RT 1: 22135-26117 bp Neighborhood of RT #1 [22135, 26143] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 22135-23166 bp Feature: domain Description: Asparaginase_2 Location: 22225-23158 bp Feature: domain Description: Asparaginase_2 Location: 2 2 2 2 5-2 3158 bp Feature: gene Location: 23493-23642 bp Feature: gene Location: 23690-24136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23996-24098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3996-2 4098 bp Feature: gene Location: 24358-24729 bp Feature: gene Location: 24782-26143 bp Feature: domain Description: DcuC Location: 24785-26117 bp Feature: domain Description: DcuC Location: 2 4785-2 6117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)