myRT

myRT report for GCA_009856265.1_ASM985626v1

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Seq: WMES01000018.1 Virgibacillus halodenitrificans strain 22512_25_Salt NODE_18_length_83183_cov_5.89111, whole genome shotgun sequence (83183 bp)
Overview 1 RT 1: 27888-33065 bp 2 RT 2: 76932-81133 bp Neighborhood of RT #1 [27888, 33073] AmpS MhpC RVT-GII group_II_RT_mat HNHc DUF3221 Neighborhood of RT #2 [76932, 81133] RVT-GII HNHc Acetyltransf_1 Feature: gene Location: 27888-28997 bp Feature: domain Description: AmpS Location: 27903-28974 bp Feature: domain Description: AmpS Location: 27903-28974 bp Feature: gene Location: 29037-29969 bp Feature: domain Description: MhpC Location: 29133-29955 bp Feature: domain Description: MhpC Location: 291 33-29955 bp Feature: gene Location: 30801-31583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31059-31440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 059-31 440 bp Feature: gene Location: 31646-32464 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31649-31886 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31 649-31 886 bp Feature: domain Description: HNHc Note: nucleases Location: 32213-32351 bp Feature: domain Description: HNHc Note: nucleases Location: 3221 3-32351 bp Feature: gene Location: 32651-33073 bp Feature: domain Description: DUF3221 Location: 32831-33065 bp Feature: domain Description: DUF3221 Location: 32831 -33065 bp Feature: gene Location: 76932-77351 bp Feature: gene Location: 77383-77595 bp Feature: gene Location: 77983-79857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78355-79054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78355-79054 bp Feature: domain Description: HNHc Note: nucleases Location: 79609-79747 bp Feature: domain Description: HNHc Note: nucleases Location: 79609-79747 bp Feature: gene Location: 80077-80529 bp Feature: domain Description: Acetyltransf_1 Location: 80209-80464 bp Feature: domain Description: Acetyltransf_1 Location: 80209-80464 bp Feature: gene Location: 80669-81133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmpS (COG2309), MhpC (COG0596), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), DUF3221 (pfam11518), Acetyltransf_1 (pfam00583)