myRT

myRT report for GCA_009856815.1_ASM985681v1

Download annotations/find similar RTs

Seq: WVUM01000112.1 Muribaculum intestinale strain NM03_1-53 NODE_112_length_2506_cov_288.106, whole genome shotgun sequence (2506 bp)
Overview 1 RT 1: 122-2468 bp Neighborhood of RT #1 [122, 2468] RVT_N RVT-GII GIIM Feature: gene Location: 122-1831 bp Feature: domain Description: RVT_N Location: 185-428 bp Feature: domain Description: RVT_N Location: 1 85-428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1 1 42 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1433 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 99-1 433 bp Feature: gene Location: 2310-2468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WVUM01000113.1 Muribaculum intestinale strain NM03_1-53 NODE_113_length_2419_cov_439.946, whole genome shotgun sequence (2419 bp)
Overview 1 RT 1: 95-2257 bp Neighborhood of RT #1 [95, 2257] RVT_N RVT-GII GIIM Feature: gene Location: 95-1798 bp Feature: domain Description: RVT_N Location: 167-404 bp Feature: domain Description: RVT_N Location: 167-404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1109 bp Feature: domain Description: GIIM Note: maturase Location: 1160-1394 bp Feature: domain Description: GIIM Note: maturase Location: 1160-1394 bp Feature: gene Location: 1861-1992 bp Feature: gene Location: 2030-2257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WVUM01000034.1 Muribaculum intestinale strain NM03_1-53 NODE_34_length_40050_cov_157.836, whole genome shotgun sequence (40050 bp)
Overview 1 RT 1: 17202-22038 bp Neighborhood of RT #1 [17202, 22076] RVT-DGRs MurNAc-LAA Feature: gene Location: 17202-18842 bp Feature: gene Location: 19019-19342 bp Feature: gene Location: 19678-20976 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19888-20515 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19888-20515 bp Feature: gene Location: 20981-21469 bp Feature: gene Location: 21453-22076 bp Feature: domain Description: MurNAc-LAA Location: 21462-22038 bp Feature: domain Description: MurNAc-LAA Location: 21462-2203 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, MurNAc-LAA (cl02713)

Seq: WVUM01000048.1 Muribaculum intestinale strain NM03_1-53 NODE_48_length_26323_cov_106.285, whole genome shotgun sequence (26323 bp)
Overview 1 RT 1: 2734-8595 bp Neighborhood of RT #1 [2734, 8624] RVT-UG24 dnaG Feature: gene Location: 2734-2949 bp Feature: gene Location: 3020-3166 bp Feature: gene Location: 3418-6858 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 3931-4393 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 3931-4 393 bp Feature: gene Location: 6848-7582 bp Feature: gene Location: 7587-8624 bp Feature: domain Description: dnaG Location: 7680-8595 bp Feature: domain Description: dnaG Location: 7680-8595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, dnaG (TIGR01391)

Seq: WVUM01000051.1 Muribaculum intestinale strain NM03_1-53 NODE_51_length_24865_cov_191.7, whole genome shotgun sequence (24865 bp)
Overview 1 RT 1: 4419-15824 bp Neighborhood of RT #1 [4419, 17644] RVT-DGRs Prophage_tail Prophage_tail Feature: gene Location: 4419-11990 bp Feature: gene Location: 12000-12335 bp Feature: gene Location: 12393-13784 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12645-13248 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12645 -13248 bp Feature: gene Location: 13791-14294 bp Feature: gene Location: 14291-17644 bp Feature: domain Description: Prophage_tail Location: 14714-14960 bp Feature: domain Description: Prophage_tail Location: 14714-14960 bp Feature: domain Description: Prophage_tail Location: 15668-15824 bp Feature: domain Description: Prophage_tail Location: 15 668-15 824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Prophage_tail (pfam06605)

Seq: WVUM01000055.1 Muribaculum intestinale strain NM03_1-53 NODE_55_length_22592_cov_140.703, whole genome shotgun sequence (22592 bp)
Overview 1 RT 1: 18007-22591 bp Neighborhood of RT #1 [18007, 22591] RteC TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 18007-18666 bp Feature: domain Description: RteC Location: 18286-18616 bp Feature: domain Description: RteC Location: 18286 -186 16 bp Feature: gene Location: 18812-20026 bp Feature: domain Description: TraG-D_C Location: 19394-19724 bp Feature: domain Description: TraG-D_C Location: 19394-19724 bp Feature: gene Location: 20031-21683 bp Feature: domain Description: RVT_N Location: 20085-20328 bp Feature: domain Description: RVT_N Location: 20085-20328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20373-21021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20373-21021 bp Feature: domain Description: GIIM Note: maturase Location: 21075-21306 bp Feature: domain Description: GIIM Note: maturase Location: 21075-21306 bp Feature: gene Location: 22328-22591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RteC (pfam09357), TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WVUM01000099.1 Muribaculum intestinale strain NM03_1-53 NODE_99_length_4852_cov_143.442, whole genome shotgun sequence (4852 bp)
Overview 1 RT 1: 2-4601 bp Neighborhood of RT #1 [2, 4601] RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 2-502 bp Feature: gene Location: 1046-2863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1313-2135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1313-2135 bp Feature: domain Description: Intron_maturas2 Location: 2276-2513 bp Feature: domain Description: Intron_maturas2 Location: 227 6-2513 bp Feature: domain Description: HNHc Note: nucleases Location: 2684-2834 bp Feature: domain Description: HNHc Note: nucleases Location: 2684-2834 bp Feature: gene Location: 2827-3801 bp Feature: domain Description: TraG-D_C Location: 3205-3535 bp Feature: domain Description: TraG-D_C Location: 3205-3535 bp Feature: gene Location: 3849-4601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)