myRT

myRT report for GCA_009856855.1_ASM985685v1

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Seq: WVUE01000002.1 Klebsiella pneumoniae strain CRKP380 contig00002, whole genome shotgun sequence (330499 bp)
Overview 1 RT 1: 3-2662 bp Neighborhood of RT #1 [3, 2712] RVT-GII int Feature: gene Location: 3-1244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-1 098 bp Feature: gene Location: 1250-1417 bp Feature: gene Location: 1660-2712 bp Feature: domain Description: int Location: 1663-2662 bp Feature: domain Description: int Location: 1 663-2662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, int (PHA02601)

Seq: WVUE01000029.1 Klebsiella pneumoniae strain CRKP380 contig00029, whole genome shotgun sequence (28634 bp)
Overview 1 RT 1: 2-3035 bp Neighborhood of RT #1 [2, 3040] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 2-178 bp Feature: domain Description: PRK09678 Location: 11-161 bp Feature: domain Description: PRK09678 Location: 11-161 bp Feature: gene Location: 425-613 bp Feature: gene Location: 1056-1355 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1059-1170 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1059-1170 bp Feature: gene Location: 1971-2453 bp Feature: domain Description: SmpB Location: 2001-2445 bp Feature: domain Description: SmpB Location: 2 001-2 445 bp Feature: gene Location: 2564-3040 bp Feature: domain Description: PRK10724 Location: 2570-3035 bp Feature: domain Description: PRK1072 4 Location: 2 570-3035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: WVUE01000054.1 Klebsiella pneumoniae strain CRKP380 contig00054, whole genome shotgun sequence (2492 bp)
Overview 1 RT 1: 3-2046 bp Neighborhood of RT #1 [3, 2291] PHA02517 RVT-GII GIIM Feature: gene Location: 3-176 bp Feature: domain Description: PHA02517 Location: 12-111 bp Feature: domain Description: PHA02517 Location: 12-111 bp Feature: gene Location: 768-2291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041-1773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041-1773 bp Feature: domain Description: GIIM Note: maturase Location: 1848-2046 bp Feature: domain Description: GIIM Note: maturase Location: 1848-2046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)