myRT

myRT report for GCA_009856925.1_ASM985692v1

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Seq: WVSX01000059.1 Klebsiella pneumoniae strain BOX-2 BOX2_S50_R1_(paired)_contig_59, whole genome shotgun sequence (17903 bp)
Overview 1 RT 1: 3851-8287 bp Neighborhood of RT #1 [3851, 8295] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 3851-4228 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3854-4226 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3854-4226 bp Feature: gene Location: 4273-4548 bp Feature: domain Description: InsA Location: 4276-4540 bp Feature: domain Description: InsA Location: 4276-4540 bp Feature: gene Location: 4700-6187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5105-5795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 05-5795 bp Feature: gene Location: 6341-7024 bp Feature: domain Description: PRK10276 Location: 6644-7007 bp Feature: domain Description: PRK1 0276 Location: 6644-7007 bp Feature: gene Location: 7024-8295 bp Feature: domain Description: umuC Location: 7027-8287 bp Feature: domain Description: umuC Location: 7027-8287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: WVSX01000068.1 Klebsiella pneumoniae strain BOX-2 BOX2_S50_R1_(paired)_contig_68, whole genome shotgun sequence (9252 bp)
Overview 1 RT 1: 5773-8807 bp Neighborhood of RT #1 [5773, 8807] RVT-Retrons CspC Feature: gene Location: 5773-6150 bp Feature: gene Location: 6784-6966 bp Feature: gene Location: 6988-8127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7132-7687 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7132 -7687 bp Feature: gene Location: 8132-8335 bp Feature: domain Description: CspC Location: 8135-8330 bp Feature: domain Description: CspC Location: 8135-8330 bp Feature: gene Location: 8544-8807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)

Seq: WVSX01000076.1 Klebsiella pneumoniae strain BOX-2 BOX2_S50_R1_(paired)_contig_76, whole genome shotgun sequence (42651 bp)
Overview 1 RT 1: 2081-6964 bp Neighborhood of RT #1 [2081, 6966] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 2081-3346 bp Feature: domain Description: umuC Location: 2084-3344 bp Feature: domain Description: umuC Location: 2084-3 3 44 bp Feature: gene Location: 3571-3759 bp Feature: gene Location: 4019-4927 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4292-4748 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4292-4748 bp Feature: gene Location: 5128-5796 bp Feature: domain Description: PRK09951 Location: 5131-5794 bp Feature: domain Description: PRK09951 Location: 513 1-5794 bp Feature: gene Location: 6001-6966 bp Feature: domain Description: PRK15110 Location: 6004-6964 bp Feature: domain Description: PRK15110 Location: 6004-6964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)