myRT

myRT report for GCA_009861545.1_ASM986154v1

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Seq: VXME01000030.1 Acidobacteria bacterium isolate SB0661_bin_3 NODE_3187_length_13701_cov_67.609409, whole genome shotgun sequence (13701 bp)
Overview 1 RT 1: 1750-7790 bp Neighborhood of RT #1 [1750, 7825] COG4249 RVT-GII GIIM COG4249 SLR SEL1 SEL1 Feature: gene Location: 1750-3348 bp Feature: gene Location: 3345-4064 bp Feature: domain Description: COG4249 Location: 3420-3927 bp Feature: domain Description: COG4249 Location: 3420-3927 bp Feature: gene Location: 4293-5645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4593-5265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4593-5265 bp Feature: domain Description: GIIM Note: maturase Location: 5337-5547 bp Feature: domain Description: GIIM Note: maturase Location: 5337-5547 bp Feature: gene Location: 5769-6113 bp Feature: gene Location: 6221-7825 bp Feature: domain Description: COG4249 Location: 6311-7022 bp Feature: domain Description: COG4249 Location: 631 1 -7022 bp Feature: domain Description: SLR Location: 7109-7478 bp Feature: domain Description: SLR Location: 71 09-7478 bp Feature: domain Description: SEL1 Location: 7580-7682 bp Feature: domain Description: SEL1 Location: 7580-7682 bp Feature: domain Description: SEL1 Location: 7685-7790 bp Feature: domain Description: SEL1 Location: 7685-7790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4249 (Uncharacterized protein, contains caspase domain ), RVT-GII, GIIM (pfam08388), SLR (sd00010), SEL1 (smart00671)

Seq: VXME01000170.1 Acidobacteria bacterium isolate SB0661_bin_3 NODE_3717_length_11604_cov_62.958092, whole genome shotgun sequence (11604 bp)
Overview 1 RT 1: 24-6057 bp Neighborhood of RT #1 [24, 6218] COG0610 COG0610 RVT-UG16 RE_XamI DEXDc_RapA SF2_C_SNF PRK04914 Feature: gene Location: 24-506 bp Feature: domain Description: COG0610 Location: 99-354 bp Feature: domain Description: COG0610 Location: 99-354 bp Feature: domain Description: COG0610 Location: 354-480 bp Feature: domain Description: COG0610 Location: 354-480 bp Feature: gene Location: 730-990 bp Feature: gene Location: 1615-3102 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 1990-2389 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 1990-2 389 bp Feature: gene Location: 3105-3938 bp Feature: domain Description: RE_XamI Location: 3228-3885 bp Feature: domain Description: RE_XamI Location: 32 2 8-3885 bp Feature: gene Location: 4167-6218 bp Feature: domain Description: DEXDc_RapA Location: 4509-5088 bp Feature: domain Description: DEXDc_RapA Location: 4509-5088 bp Feature: domain Description: SF2_C_SNF Location: 5175-5415 bp Feature: domain Description: SF2 _C_SNF Location: 5175-5415 bp Feature: domain Description: PRK04914 Location: 5946-6057 bp Feature: domain Description: PRK04914 Location: 5946-6057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG16, RE_XamI (pfam09572), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793), PRK04914 (RNA polymerase-associated protein RapA)