myRT

myRT report for GCA_009864815.1_ASM986481v1

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Seq: WWEZ01000015.1 Bradyrhizobium japonicum strain 5873 Bj5873_Scf_15, whole genome shotgun sequence (218688 bp)
Overview 1 RT 1: 150670-154148 bp Neighborhood of RT #1 [150670, 154148] Tra5 HTH_Tnp_1 RVT-GII GIIM Feature: gene Location: 150670-151542 bp Feature: domain Description: Tra5 Location: 150712-151420 bp Feature: domain Description: Tra5 Location: 1 5071 2-1 51 420 bp Feature: gene Location: 151520-151774 bp Feature: domain Description: HTH_Tnp_1 Location: 151526-151733 bp Feature: domain Description: HTH_Tnp_1 Location: 1 51 526-1 51 733 bp Feature: gene Location: 151951-153249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152206-152860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 52206-1 52860 bp Feature: domain Description: GIIM Note: maturase Location: 152941-153169 bp Feature: domain Description: GIIM Note: maturase Location: 1 52941 -1 531 69 bp Feature: gene Location: 153255-153395 bp Feature: gene Location: 154014-154148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)

Seq: WWEZ01000029.1 Bradyrhizobium japonicum strain 5873 Bj5873_Scf_29, whole genome shotgun sequence (27012 bp)
Overview 1 RT 1: 56-5526 bp Neighborhood of RT #1 [56, 5526] RVT-GII RVT-GII Feature: gene Location: 56-475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215-311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 15-311 bp Feature: gene Location: 1156-1503 bp Feature: gene Location: 1536-2918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1863-2553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1863-2 553 bp Feature: gene Location: 2989-3135 bp Feature: gene Location: 3211-5526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WWEZ01000032.1 Bradyrhizobium japonicum strain 5873 Bj5873_Scf_32, whole genome shotgun sequence (21470 bp)
Overview 1 RT 1: 14398-18814 bp Neighborhood of RT #1 [14398, 18876] DDE_Tnp_IS66 RVT-GII GIIM LomR PHA02518 Feature: gene Location: 14398-14574 bp Feature: gene Location: 14702-15427 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14720-15155 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14720-15155 bp Feature: gene Location: 15664-16992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15955-16618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15955-16618 bp Feature: domain Description: GIIM Note: maturase Location: 16684-16906 bp Feature: domain Description: GIIM Note: maturase Location: 16684-16906 bp Feature: gene Location: 16928-17764 bp Feature: domain Description: LomR Location: 16964-17675 bp Feature: domain Description: LomR Location: 16964-17675 bp Feature: gene Location: 18208-18876 bp Feature: domain Description: PHA02518 Location: 18217-18814 bp Feature: domain Description: PHA02518 Location: 18217-18814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), LomR (COG3637), PHA02518 (ParA-like protein; Provisional)

Seq: WWEZ01000036.1 Bradyrhizobium japonicum strain 5873 Bj5873_Scf_36, whole genome shotgun sequence (18746 bp)
Overview 1 RT 1: 477-3526 bp Neighborhood of RT #1 [477, 3526] RVT-GII MdlB Feature: gene Location: 477-656 bp Feature: gene Location: 1014-1208 bp Feature: gene Location: 1250-1954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1577-1946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1577-194 6 bp Feature: gene Location: 1951-3117 bp Feature: domain Description: MdlB Location: 2011-3094 bp Feature: domain Description: MdlB Location: 2011-3094 bp Feature: gene Location: 3125-3526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MdlB (COG1132)

Seq: WWEZ01000038.1 Bradyrhizobium japonicum strain 5873 Bj5873_Scf_38, whole genome shotgun sequence (14770 bp)
Overview 1 RT 1: 8185-11032 bp Neighborhood of RT #1 [8185, 11032] RVT-GII GIIM Feature: gene Location: 8185-8397 bp Feature: gene Location: 8607-9008 bp Feature: gene Location: 9068-10249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9269-9926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9269-9926 bp Feature: domain Description: GIIM Note: maturase Location: 10001-10208 bp Feature: domain Description: GIIM Note: maturase Location: 10001-10208 bp Feature: gene Location: 10473-10703 bp Feature: gene Location: 10841-11032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WWEZ01000046.1 Bradyrhizobium japonicum strain 5873 Bj5873_Scf_46, whole genome shotgun sequence (8111 bp)
Overview 1 RT 1: 3678-6623 bp Neighborhood of RT #1 [3678, 6623] RVT-GII RVT-GII DDE_Tnp_1_4 Feature: gene Location: 3678-4007 bp Feature: gene Location: 4077-4367 bp Feature: gene Location: 4501-4773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4504-4762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4504-476 2 bp Feature: gene Location: 4734-5492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4752-5115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4752-5115 bp Feature: gene Location: 5591-6046 bp Feature: domain Description: DDE_Tnp_1_4 Location: 5627-5801 bp Feature: domain Description: DDE_Tnp_1_4 Location: 56 27-5801 bp Feature: gene Location: 6219-6623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_4 (pfam13701)