myRT

myRT report for GCA_009870825.1_ASM987082v1

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Seq: WTWY01000012.1 Paenibacillus sp. USDA918EY NODE_12_length_182553_cov_244.196791, whole genome shotgun sequence (182553 bp)
Overview 1 RT 1: 3063-7888 bp Neighborhood of RT #1 [3063, 7950] GerA HTH_MARR RVT-GII GIIM DUF4386 Feature: gene Location: 3063-4604 bp Feature: domain Description: GerA Location: 3156-4530 bp Feature: domain Description: GerA Location: 31 56-4530 bp Feature: gene Location: 4832-5107 bp Feature: domain Description: HTH_MARR Location: 4919-5051 bp Feature: domain Description: HTH_MARR Location: 491 9-5051 bp Feature: gene Location: 5217-6509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5517-6150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551 7-61 50 bp Feature: domain Description: GIIM Note: maturase Location: 6240-6447 bp Feature: domain Description: GIIM Note: maturase Location: 6240-6447 bp Feature: gene Location: 6682-6894 bp Feature: gene Location: 7228-7950 bp Feature: domain Description: DUF4386 Location: 7258-7888 bp Feature: domain Description: DUF4386 Location: 7258-7888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GerA (pfam03323), HTH_MARR (smart00347), RVT-GII, GIIM (pfam08388), DUF4386 (pfam14329)

Seq: WTWY01000002.1 Paenibacillus sp. USDA918EY NODE_2_length_791257_cov_269.043401, whole genome shotgun sequence (791257 bp)
Overview 1 RT 1: 331793-340166 bp Neighborhood of RT #1 [331793, 340171] COG3538 PurR RVT-GII GIIM RVT-GII RVT-GII EfiE EfiE Feature: gene Location: 331793-333085 bp Feature: domain Description: COG3538 Location: 331841-333080 bp Feature: domain Description: COG3538 Location: 331841-333080 bp Feature: gene Location: 333418-334674 bp Feature: domain Description: PurR Location: 333643-334660 bp Feature: domain Description: PurR Location: 333643-334660 bp Feature: gene Location: 334844-335584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334847-335225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334847-3352 2 5 bp Feature: domain Description: GIIM Note: maturase Location: 335315-335525 bp Feature: domain Description: GIIM Note: maturase Location: 335315-33552 5 bp Feature: gene Location: 335729-337018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335984-336671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335984-336671 bp Feature: gene Location: 337520-338062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337820-338051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33782 0-338051 bp Feature: gene Location: 338704-339447 bp Feature: domain Description: EfiE Location: 338719-339328 bp Feature: domain Description: EfiE Location: 338719-33932 8 bp Feature: gene Location: 339449-340171 bp Feature: domain Description: EfiE Location: 339464-340166 bp Feature: domain Description: EfiE Location: 339464-340166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3538 (Meiotically up-regulated gene 157 (Mug157) protein (function unknown) ), PurR (COG1609), RVT-GII, GIIM (pfam08388), EfiE (COG4200)