myRT

myRT report for GCA_009872365.1_ASM987236v1

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Seq: WXYH01000151.1 Rhodococcus sp. T7 MLGJGCBP_152, whole genome shotgun sequence (3802 bp)
Overview 1 RT 1: 1-2885 bp Neighborhood of RT #1 [1, 2944] Phage_int_SAM_1 RVT-GII GIIM Tra8 DUF4189 Feature: gene Location: 1-720 bp Feature: domain Description: Phage_int_SAM_1 Location: 343-571 bp Feature: domain Description: Phage_int_SAM_1 Location: 343-571 bp Feature: gene Location: 887-1621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890-1175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890-1 1 75 bp Feature: domain Description: GIIM Note: maturase Location: 1250-1466 bp Feature: domain Description: GIIM Note: maturase Location: 1 250-1 466 bp Feature: gene Location: 1764-2228 bp Feature: domain Description: Tra8 Location: 1770-2163 bp Feature: domain Description: Tra8 Location: 1 770-21 63 bp Feature: gene Location: 2483-2944 bp Feature: domain Description: DUF4189 Location: 2615-2885 bp Feature: domain Description: DUF41 89 Location: 261 5-2885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), Tra8 (COG2826), DUF4189 (pfam13827), RVT-GII, GIIM (pfam08388)

Seq: WXYH01000154.1 Rhodococcus sp. T7 MLGJGCBP_155, whole genome shotgun sequence (93685 bp)
Overview 1 RT 1: 76862-81395 bp Neighborhood of RT #1 [76862, 81454] NMO MFS_YjiJ RVT-Retrons RT_Bac_retron_II SDR_c Feature: gene Location: 76862-77896 bp Feature: domain Description: NMO Location: 76895-77876 bp Feature: domain Description: NMO Location: 76895-77876 bp Feature: gene Location: 77787-79208 bp Feature: domain Description: MFS_YjiJ Location: 78105-79164 bp Feature: domain Description: MFS_YjiJ Location: 78105-79164 bp Feature: gene Location: 79454-80287 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79871-80066 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79871-80066 bp Feature: gene Location: 80365-80697 bp Feature: domain Description: RT_Bac_retron_II Location: 80371-80536 bp Feature: domain Description: RT_Bac_retron_II Location: 80371-80536 bp Feature: gene Location: 80714-81454 bp Feature: domain Description: SDR_c Location: 80732-81395 bp Feature: domain Description: SDR_c Location: 80732 -81395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NMO (pfam03060), MFS_YjiJ (cd06180), RVT-Retrons, RT_Bac_retron_II (cd03487), SDR_c (cd05233)

Seq: WXYH01000163.1 Rhodococcus sp. T7 MLGJGCBP_164, whole genome shotgun sequence (3090 bp)
Overview 1 RT 1: 715-3003 bp Neighborhood of RT #1 [715, 3050] RVT-GII GIIM DDE_Tnp_1_4 Feature: gene Location: 715-1977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 1-1591 bp Feature: domain Description: GIIM Note: maturase Location: 1669-1888 bp Feature: domain Description: GIIM Note: maturase Location: 1669-1888 bp Feature: gene Location: 2175-3050 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2211-3003 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2211-3 003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-GII, GIIM (pfam08388)

Seq: WXYH01000389.1 Rhodococcus sp. T7 MLGJGCBP_390, whole genome shotgun sequence (949695 bp)
Overview 1 RT 1: 649276-652765 bp Neighborhood of RT #1 [649276, 652824] RVT-GII GIIM Tra8 DUF4189 Feature: gene Location: 649276-649890 bp Feature: gene Location: 650244-650558 bp Feature: gene Location: 650767-651501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 650770-651055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 650770-651055 bp Feature: domain Description: GIIM Note: maturase Location: 651130-651346 bp Feature: domain Description: GIIM Note: maturase Location: 651130-65134 6 bp Feature: gene Location: 651626-652108 bp Feature: domain Description: Tra8 Location: 651638-652043 bp Feature: domain Description: Tra8 Location: 651638-65204 3 bp Feature: gene Location: 652363-652824 bp Feature: domain Description: DUF4189 Location: 652495-652765 bp Feature: domain Description: DUF4 189 Location: 6524 95-652765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra8 (COG2826), DUF4189 (pfam13827)