myRT

myRT report for GCA_009874105.1_ASM987410v1

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Seq: WWTL01000015.1 Clostridium sp. BIOML-A1 scaffold15_size68665, whole genome shotgun sequence (68665 bp)
Overview 1 RT 1: 11180-14625 bp Neighborhood of RT #1 [11180, 14625] Phage_XkdX RVT-DGRs Avd_like Feature: gene Location: 11180-11392 bp Feature: domain Description: Phage_XkdX Location: 11267-11384 bp Feature: domain Description: Phage_XkdX Location: 1 1 267-1 1 384 bp Feature: gene Location: 11394-11567 bp Feature: gene Location: 11572-12726 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11893-12502 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 893-1 2502 bp Feature: gene Location: 12909-13325 bp Feature: domain Description: Avd_like Location: 12960-13293 bp Feature: domain Description: Avd_like Location: 1 2960-1 3293 bp Feature: gene Location: 13393-14625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, Avd_like (cd16376)

Seq: WWTL01000016.1 Clostridium sp. BIOML-A1 scaffold16_size63091, whole genome shotgun sequence (63091 bp)
Overview 1 RT 1: 21141-24287 bp Neighborhood of RT #1 [21141, 24287] Apt RVT-Retrons Feature: gene Location: 21141-22031 bp Feature: domain Description: Apt Location: 21609-21768 bp Feature: domain Description: Apt Location: 2 1609-2 1768 bp Feature: gene Location: 22034-22318 bp Feature: gene Location: 22518-23606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22806-23355 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 806-2 3355 bp Feature: gene Location: 23672-23923 bp Feature: gene Location: 23907-24287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Apt (COG0503), RVT-Retrons

Seq: WWTL01000001.1 Clostridium sp. BIOML-A1 scaffold1_size349285, whole genome shotgun sequence (349176 bp)
Overview 1 RT 1: 199135-202752 bp Neighborhood of RT #1 [199135, 202787] RVT-UNC VanZ Feature: gene Location: 199135-199293 bp Feature: gene Location: 199370-199669 bp Feature: gene Location: 200200-201756 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 200629-201064 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 200629-201064 bp Feature: gene Location: 201802-202134 bp Feature: gene Location: 202320-202787 bp Feature: domain Description: VanZ Location: 202374-202752 bp Feature: domain Description: VanZ Location: 2023 74-202752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK/RVT-UG12/RVT-UG15/RVT-UG7(RVT-UNC), VanZ (pfam04892)