myRT

myRT report for GCA_009875795.1_ASM987579v1

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Seq: WWSI01000002.1 Coprococcus sp. BIOML-A2 scaffold2_size602506, whole genome shotgun sequence (602506 bp)
Overview 1 RT 1: 183508-187476 bp Neighborhood of RT #1 [183508, 187476] FGE-sulfatase Avd_like RVT-DGRs Feature: gene Location: 183508-184557 bp Feature: domain Description: FGE-sulfatase Location: 183748-184072 bp Feature: domain Description: FGE-sulfatase Location: 1 83748-1 84072 bp Feature: gene Location: 184694-185092 bp Feature: domain Description: Avd_like Location: 184736-185057 bp Feature: domain Description: Avd_like Location: 1 84736-1 85057 bp Feature: gene Location: 185451-186596 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 185685-186345 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 85685-1 86345 bp Feature: gene Location: 186766-187239 bp Feature: gene Location: 187255-187476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs

Seq: WWSI01000003.1 Coprococcus sp. BIOML-A2 scaffold3_size610479, whole genome shotgun sequence (610501 bp)
Overview 1 RT 1: 549549-555175 bp Neighborhood of RT #1 [549549, 555175] DUF3851 TraC-F-type RVT-GII HNHc Feature: gene Location: 549549-549926 bp Feature: domain Description: DUF3851 Location: 549552-549924 bp Feature: domain Description: DUF3851 Location: 549552 -54992 4 bp Feature: gene Location: 549929-551326 bp Feature: domain Description: TraC-F-type Location: 549953-551126 bp Feature: domain Description: TraC-F-type Location: 549953-55112 6 bp Feature: gene Location: 551462-553435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551798-552536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551798-552 536 bp Feature: domain Description: HNHc Note: nucleases Location: 553091-553229 bp Feature: domain Description: HNHc Note: nucleases Location: 553091-5532 2 9 bp Feature: gene Location: 553788-554087 bp Feature: gene Location: 554159-555175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3851 (pfam12962), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: WWSI01000006.1 Coprococcus sp. BIOML-A2 scaffold6_size134626, whole genome shotgun sequence (134626 bp)
Overview 1 RT 1: 120425-124817 bp Neighborhood of RT #1 [120425, 124817] DUF3751 RVT-DGRs Feature: gene Location: 120425-120976 bp Feature: domain Description: DUF3751 Location: 120449-120890 bp Feature: domain Description: DUF3 751 Location: 120449-120890 bp Feature: gene Location: 120976-122253 bp Feature: gene Location: 122675-123898 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 122969-123590 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 122969-123 590 bp Feature: gene Location: 123837-124100 bp Feature: gene Location: 124464-124817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3751 (pfam12571), RVT-DGRs