myRT

myRT report for GCA_009881425.1_ASM988142v1

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Seq: WWVI01000133.1 Blautia wexlerae strain BIOML-A9 scaffold133_size6217, whole genome shotgun sequence (6217 bp)
Overview 1 RT 1: 1100-6214 bp Neighborhood of RT #1 [1100, 6214] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII PRK13351 PRK13351 Feature: gene Location: 1100-2041 bp Feature: domain Description: INT_RitB_C_like Location: 1397-1976 bp Feature: domain Description: INT_RitB_C_like Location: 1 397-1 976 bp Feature: gene Location: 2073-3308 bp Feature: domain Description: Phage_int_SAM_1 Location: 2424-2661 bp Feature: domain Description: Phage_int_SAM_1 Location: 2424-2661 bp Feature: domain Description: INT_RitA_C_like Location: 2742-3273 bp Feature: domain Description: INT_RitA_C_like Location: 2742-3273 bp Feature: gene Location: 3478-3651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481-3649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481 -3649 bp Feature: gene Location: 3957-5876 bp Feature: domain Description: PRK13351 Location: 3960-4425 bp Feature: domain Description: PRK1 3351 Location: 3960-4425 bp Feature: domain Description: PRK13351 Location: 4482-5805 bp Feature: domain Description: PRK1 3351 Location: 4482-5805 bp Feature: gene Location: 6017-6214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, PRK13351 (elongation factor G-like protein)

Seq: WWVI01000013.1 Blautia wexlerae strain BIOML-A9 scaffold13_size87196, whole genome shotgun sequence (87196 bp)
Overview 1 RT 1: 263-3363 bp Neighborhood of RT #1 [263, 3428] RVT-GII GIIM Cupin_2 Sa_NUDIX Feature: gene Location: 263-406 bp Feature: gene Location: 415-1713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670-1357 bp Feature: domain Description: GIIM Note: maturase Location: 1438-1642 bp Feature: domain Description: GIIM Note: maturase Location: 1438-1642 bp Feature: gene Location: 1860-2492 bp Feature: domain Description: Cupin_2 Location: 2031-2133 bp Feature: domain Description: Cupin_2 Location: 2 031-2 133 bp Feature: gene Location: 2535-3428 bp Feature: domain Description: Sa_NUDIX Location: 2769-3363 bp Feature: domain Description: Sa_NUDIX Location: 2 769-3363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Cupin_2 (pfam07883), Sa_NUDIX (pfam18167)

Seq: WWVI01000180.1 Blautia wexlerae strain BIOML-A9 scaffold180_size1426, whole genome shotgun sequence (1338 bp)
Overview 1 RT 1: 1-1123 bp Neighborhood of RT #1 [1, 1123] RVT-GII Feature: gene Location: 1-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: gene Location: 929-1123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WWVI01000021.1 Blautia wexlerae strain BIOML-A9 scaffold21_size65177, whole genome shotgun sequence (65067 bp)
Overview 1 RT 1: 87-3681 bp Neighborhood of RT #1 [87, 4067] RVT-GII YodL LPD16 DUF4316 LPD25 Feature: gene Location: 87-833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 38-822 bp Feature: gene Location: 847-1059 bp Feature: gene Location: 1317-4067 bp Feature: domain Description: YodL Location: 2097-2391 bp Feature: domain Description: YodL Location: 2097-2391 bp Feature: domain Description: LPD16 Location: 2421-2643 bp Feature: domain Description: LPD16 Location: 24 21-264 3 bp Feature: domain Description: DUF4316 Location: 2691-2775 bp Feature: domain Description: DUF4 316 Location: 2691-2775 bp Feature: domain Description: LPD25 Location: 3384-3681 bp Feature: domain Description: LPD25 Location: 3384 -3681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840)

Seq: WWVI01000002.1 Blautia wexlerae strain BIOML-A9 scaffold2_size135936, whole genome shotgun sequence (136084 bp)
Overview 1 RT 1: 117527-133746 bp Neighborhood of RT #1 [117527, 133796] N6_Mtase COG4646 RVT-GII COG4646 HELICc RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII Intron_maturas2 HNHc KOG1000 SpoVG SpoVG Feature: gene Location: 117527-122563 bp Feature: domain Description: N6_Mtase Location: 119858-120485 bp Feature: domain Description: N6_Mtase Location: 11985 8-120485 bp Feature: domain Description: COG4646 Location: 120512-122543 bp Feature: domain Description: COG4646 Location: 1205 12-1225 43 bp Feature: gene Location: 123079-123237 bp Feature: gene Location: 123241-125148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123565-124279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235 65 -124279 bp Feature: gene Location: 125308-126300 bp Feature: domain Description: COG4646 Location: 125323-125899 bp Feature: domain Description: COG4646 Location: 125 323-125 899 bp Feature: domain Description: HELICc Location: 125926-126271 bp Feature: domain Description: HELICc Location: 125 926-126271 bp Feature: gene Location: 126423-126617 bp Feature: gene Location: 126850-127560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127114-127489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127114-127489 bp Feature: gene Location: 127605-128507 bp Feature: domain Description: Phage_int_SAM_1 Location: 127614-127794 bp Feature: domain Description: Phage_int_SAM_1 Location: 127614-127794 bp Feature: domain Description: INT_RitC_C_like Location: 127875-128421 bp Feature: domain Description: INT_RitC_C_like Location: 127875 -128421 bp Feature: gene Location: 128599-129582 bp Feature: domain Description: INT_RitB_C_like Location: 128935-129520 bp Feature: domain Description: INT_RitB_C_like Location: 128935 -1295 20 bp Feature: gene Location: 129575-130810 bp Feature: domain Description: Phage_int_SAM_1 Location: 129929-130151 bp Feature: domain Description: Phage_int_SAM_1 Location: 129929-13015 1 bp Feature: domain Description: INT_RitA_C_like Location: 130244-130784 bp Feature: domain Description: INT_RitA_C_like Location: 130244-130784 bp Feature: gene Location: 130993-132138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131167-131410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131167-131410 bp Feature: domain Description: Intron_maturas2 Location: 131482-131914 bp Feature: domain Description: Intron_maturas2 Location: 131482-131914 bp Feature: domain Description: HNHc Note: nucleases Location: 131965-132109 bp Feature: domain Description: HNHc Note: nucleases Location: 131965 -132109 bp Feature: gene Location: 132219-133151 bp Feature: domain Description: KOG1000 Location: 132246-132429 bp Feature: domain Description: KOG1000 Location: 132246-132429 bp Feature: gene Location: 133185-133796 bp Feature: domain Description: SpoVG Location: 133203-133449 bp Feature: domain Description: SpoVG Location: 133203-133449 bp Feature: domain Description: SpoVG Location: 133515-133746 bp Feature: domain Description: SpoVG Location: 1335 15 -133746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, HELICc (smart00490), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188), Intron_maturas2 (pfam01348), HNHc (smart00507)
KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), SpoVG (pfam04026)