myRT

myRT report for GCA_009881475.1_ASM988147v1

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Seq: WWVK01000014.1 Blautia wexlerae strain BIOML-A7 scaffold14_size100605, whole genome shotgun sequence (100497 bp)
Overview 1 RT 1: 9297-12839 bp Neighborhood of RT #1 [9297, 12904] RVT-GII GIIM Cupin_2 Sa_NUDIX Feature: gene Location: 9297-9596 bp Feature: gene Location: 9739-9882 bp Feature: gene Location: 9891-11189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10146-10833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 46-1 0833 bp Feature: domain Description: GIIM Note: maturase Location: 10914-11118 bp Feature: domain Description: GIIM Note: maturase Location: 1 091 4-1 1 1 1 8 bp Feature: gene Location: 11336-11968 bp Feature: domain Description: Cupin_2 Location: 11507-11609 bp Feature: domain Description: Cupin_2 Location: 1 1 507-1 1 609 bp Feature: gene Location: 12011-12904 bp Feature: domain Description: Sa_NUDIX Location: 12245-12839 bp Feature: domain Description: Sa_NUDIX Location: 1 2245-1 2839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Cupin_2 (pfam07883), Sa_NUDIX (pfam18167)

Seq: WWVK01000022.1 Blautia wexlerae strain BIOML-A7 scaffold22_size78818, whole genome shotgun sequence (78378 bp)
Overview 1 RT 1: 1680-11159 bp Neighborhood of RT #1 [1680, 11545] PRK13351 PRK13351 RVT-GII Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like xerS INT_RitC_C_like RVT-GII YodL LPD16 DUF4316 LPD25 Feature: gene Location: 1680-3599 bp Feature: domain Description: PRK13351 Location: 1683-2148 bp Feature: domain Description: PRK13351 Location: 1683-2 148 bp Feature: domain Description: PRK13351 Location: 2205-3528 bp Feature: domain Description: PRK13351 Location: 2 2 05-352 8 bp Feature: gene Location: 3726-3893 bp Feature: gene Location: 3905-4078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908-4076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908-4076 bp Feature: gene Location: 4248-5483 bp Feature: domain Description: Phage_int_SAM_1 Location: 4599-4836 bp Feature: domain Description: Phage_int_SAM_1 Location: 4599-4836 bp Feature: domain Description: INT_RitA_C_like Location: 4917-5448 bp Feature: domain Description: INT_RitA_C_like Location: 4917-5448 bp Feature: gene Location: 5515-6456 bp Feature: domain Description: INT_RitB_C_like Location: 5812-6391 bp Feature: domain Description: INT_RitB_C_like Location: 5812 -6391 bp Feature: gene Location: 6443-7453 bp Feature: domain Description: xerS Location: 6479-6746 bp Feature: domain Description: xerS Location: 6479-6746 bp Feature: domain Description: INT_RitC_C_like Location: 6821-7373 bp Feature: domain Description: INT_RitC_C_like Location: 682 1-7373 bp Feature: gene Location: 7565-8311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7916-8300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7916-8300 bp Feature: gene Location: 8325-8537 bp Feature: gene Location: 8795-11545 bp Feature: domain Description: YodL Location: 9575-9869 bp Feature: domain Description: YodL Location: 9575-9869 bp Feature: domain Description: LPD16 Location: 9899-10121 bp Feature: domain Description: LPD16 Location: 9899-1012 1 bp Feature: domain Description: DUF4316 Location: 10169-10253 bp Feature: domain Description: DUF4316 Location: 10169-102 53 bp Feature: domain Description: LPD25 Location: 10862-11159 bp Feature: domain Description: LPD2 5 Location: 10862 -11159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13351 (elongation factor G-like protein), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), xerS (PRK05084), INT_RitC_C_like (cd01182), YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195)
LPD25 (pfam18840)

Seq: WWVK01000026.1 Blautia wexlerae strain BIOML-A7 scaffold26_size62058, whole genome shotgun sequence (61915 bp)
Overview 1 RT 1: 58576-61913 bp Neighborhood of RT #1 [58576, 61912] PDC2_DGC_like tspaseT_teng_C tspaseT_teng_C RVT-GII Feature: gene Location: 58576-59442 bp Feature: gene Location: 59499-60671 bp Feature: domain Description: PDC2_DGC_like Location: 59655-59814 bp Feature: domain Description: PDC2_DGC_like Location: 59655-59814 bp Feature: domain Description: tspaseT_teng_C Location: 59844-59979 bp Feature: domain Description: tspaseT_teng_C Location: 59844-59979 bp Feature: domain Description: tspaseT_teng_C Location: 60183-60363 bp Feature: domain Description: tspaseT_teng_C Location: 60183 -603 63 bp Feature: gene Location: 61328-61912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61541-61913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61541-61913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDC2_DGC_like (cd12915), tspaseT_teng_C (TIGR01766), RVT-GII

Seq: WWVK01000008.1 Blautia wexlerae strain BIOML-A7 scaffold8_size108361, whole genome shotgun sequence (108361 bp)
Overview 1 RT 1: 2242-18491 bp Neighborhood of RT #1 [2242, 18511] SpoVG SpoVG KOG1000 RVT-GII Intron_maturas2 HNHc Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII COG4646 HELICc RVT-GII N6_Mtase COG4646 Feature: gene Location: 2242-2853 bp Feature: domain Description: SpoVG Location: 2260-2506 bp Feature: domain Description: SpoVG Location: 2260-2506 bp Feature: domain Description: SpoVG Location: 2572-2803 bp Feature: domain Description: SpoVG Location: 2572-2803 bp Feature: gene Location: 2887-3819 bp Feature: domain Description: KOG1000 Location: 2914-3097 bp Feature: domain Description: KOG1000 Location: 2914 -3097 bp Feature: gene Location: 3900-5045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4074-4317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 074 -4 317 bp Feature: domain Description: Intron_maturas2 Location: 4389-4821 bp Feature: domain Description: Intron_maturas2 Location: 4 389-4 821 bp Feature: domain Description: HNHc Note: nucleases Location: 4872-5016 bp Feature: domain Description: HNHc Note: nucleases Location: 4 872-5016 bp Feature: gene Location: 5228-6463 bp Feature: domain Description: Phage_int_SAM_1 Location: 5582-5804 bp Feature: domain Description: Phage_int_SAM_1 Location: 5582-5804 bp Feature: domain Description: INT_RitA_C_like Location: 5897-6437 bp Feature: domain Description: INT_RitA_C_like Location: 5897-64 37 bp Feature: gene Location: 6456-7439 bp Feature: domain Description: INT_RitB_C_like Location: 6792-7377 bp Feature: domain Description: INT_RitB_C_like Location: 6792-7377 bp Feature: gene Location: 7531-8433 bp Feature: domain Description: Phage_int_SAM_1 Location: 7540-7720 bp Feature: domain Description: Phage_int_SAM_1 Location: 754 0-7720 bp Feature: domain Description: INT_RitC_C_like Location: 7801-8347 bp Feature: domain Description: INT_RitC_C_like Location: 7801-834 7 bp Feature: gene Location: 8478-9188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8742-9117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 874 2-9117 bp Feature: gene Location: 9421-9615 bp Feature: gene Location: 9738-10730 bp Feature: domain Description: COG4646 Location: 9753-10329 bp Feature: domain Description: COG4 64 6 Location: 9753-10329 bp Feature: domain Description: HELICc Location: 10356-10701 bp Feature: domain Description: HELICc Location: 10356-10701 bp Feature: gene Location: 10890-12797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11214-11928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11214 -11928 bp Feature: gene Location: 12801-12959 bp Feature: gene Location: 13475-18511 bp Feature: domain Description: N6_Mtase Location: 15806-16433 bp Feature: domain Description: N6_Mtase Location: 15806-164 33 bp Feature: domain Description: COG4646 Location: 16460-18491 bp Feature: domain Description: COG4 64 6 Location: 164 60-184 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVG (pfam04026), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), COG4646 (Adenine-specific DNA methylase, N12 class )
HELICc (smart00490), N6_Mtase (pfam02384)