myRT

myRT report for GCA_009882595.1_ASM988259v1

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Seq: WSJD01000002.1 Escherichia coli strain 8374wF12 NODE_2_length_342134_cov_25.5852_ID_5277, whole genome shotgun sequence (342134 bp)
Overview 1 RT 1: 234517-240024 bp Neighborhood of RT #1 [234517, 240024] P Q RVT-Retrons DinI Feature: gene Location: 234517-236283 bp Feature: domain Description: P Location: 234544-236278 bp Feature: domain Description: P Location: 234544-236278 bp Feature: gene Location: 236283-237314 bp Feature: domain Description: Q Location: 236286-237309 bp Feature: domain Description: Q Location: 236286-237309 bp Feature: gene Location: 237364-239121 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 237508-238129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 237508-2381 29 bp Feature: gene Location: 239592-239825 bp Feature: domain Description: DinI Location: 239634-239820 bp Feature: domain Description: DinI Location: 239634-239820 bp Feature: gene Location: 239836-240024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, DinI (pfam06183)

Seq: WSJD01000060.1 Escherichia coli strain 8374wF12 NODE_60_length_2271_cov_238.391_ID_5393, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)