myRT

myRT report for GCA_009883035.1_ASM988303v1

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Seq: WWVO01000013.1 Blautia wexlerae strain BIOML-A3 scaffold13_size86817, whole genome shotgun sequence (86817 bp)
Overview 1 RT 1: 263-3363 bp Neighborhood of RT #1 [263, 3428] RVT-GII GIIM Cupin_2 Sa_NUDIX Feature: gene Location: 263-406 bp Feature: gene Location: 415-1713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670-1 357 bp Feature: domain Description: GIIM Note: maturase Location: 1438-1642 bp Feature: domain Description: GIIM Note: maturase Location: 1 438-1 642 bp Feature: gene Location: 1860-2492 bp Feature: domain Description: Cupin_2 Location: 2031-2133 bp Feature: domain Description: Cupin_2 Location: 2031 -21 33 bp Feature: gene Location: 2535-3428 bp Feature: domain Description: Sa_NUDIX Location: 2769-3363 bp Feature: domain Description: Sa_NUDIX Location: 2769-3363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Cupin_2 (pfam07883), Sa_NUDIX (pfam18167)

Seq: WWVO01000142.1 Blautia wexlerae strain BIOML-A3 scaffold142_size5140, whole genome shotgun sequence (5140 bp)
Overview 1 RT 1: 23-5137 bp Neighborhood of RT #1 [23, 5137] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII PRK13351 PRK13351 Feature: gene Location: 23-964 bp Feature: domain Description: INT_RitB_C_like Location: 320-899 bp Feature: domain Description: INT_RitB_C_like Location: 32 0-899 bp Feature: gene Location: 996-2231 bp Feature: domain Description: Phage_int_SAM_1 Location: 1347-1584 bp Feature: domain Description: Phage_int_SAM_1 Location: 1347-1584 bp Feature: domain Description: INT_RitA_C_like Location: 1665-2196 bp Feature: domain Description: INT_RitA_C_like Location: 1665-2 196 bp Feature: gene Location: 2401-2574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2404-2572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 404-2 572 bp Feature: gene Location: 2880-4799 bp Feature: domain Description: PRK13351 Location: 2883-3348 bp Feature: domain Description: PRK13351 Location: 2 883-3348 bp Feature: domain Description: PRK13351 Location: 3405-4728 bp Feature: domain Description: PRK13351 Location: 3405-472 8 bp Feature: gene Location: 4940-5137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, PRK13351 (elongation factor G-like protein)

Seq: WWVO01000168.1 Blautia wexlerae strain BIOML-A3 scaffold168_size3227, whole genome shotgun sequence (3179 bp)
Overview 1 RT 1: 1-2573 bp Neighborhood of RT #1 [1, 2573] RVT-GII Feature: gene Location: 1-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: gene Location: 929-1123 bp Feature: gene Location: 1245-2573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WWVO01000018.1 Blautia wexlerae strain BIOML-A3 scaffold18_size68414, whole genome shotgun sequence (68209 bp)
Overview 1 RT 1: 2-4685 bp Neighborhood of RT #1 [2, 5071] Phage_int_SAM_1 INT_RitC_C_like RVT-GII YodL LPD16 DUF4316 LPD25 Feature: gene Location: 2-979 bp Feature: domain Description: Phage_int_SAM_1 Location: 17-266 bp Feature: domain Description: Phage_int_SAM_1 Location: 17-266 bp Feature: domain Description: INT_RitC_C_like Location: 347-899 bp Feature: domain Description: INT_RitC_C_like Location: 34 7-899 bp Feature: gene Location: 1091-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1442-1826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 4 2-1826 bp Feature: gene Location: 1851-2063 bp Feature: gene Location: 2321-5071 bp Feature: domain Description: YodL Location: 3101-3395 bp Feature: domain Description: YodL Location: 3101-3395 bp Feature: domain Description: LPD16 Location: 3425-3647 bp Feature: domain Description: LPD16 Location: 34 25-364 7 bp Feature: domain Description: DUF4316 Location: 3695-3779 bp Feature: domain Description: DUF4 316 Location: 3695-3779 bp Feature: domain Description: LPD25 Location: 4388-4685 bp Feature: domain Description: LPD25 Location: 4 388-4 685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII, YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840)

Seq: WWVO01000033.1 Blautia wexlerae strain BIOML-A3 scaffold33_size45632, whole genome shotgun sequence (45632 bp)
Overview 1 RT 1: 27075-43294 bp Neighborhood of RT #1 [27075, 43344] N6_Mtase COG4646 RVT-GII COG4646 HELICc RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII Intron_maturas2 HNHc KOG1000 SpoVG SpoVG Feature: gene Location: 27075-32111 bp Feature: domain Description: N6_Mtase Location: 29406-30033 bp Feature: domain Description: N6_Mtase Location: 29406-30033 bp Feature: domain Description: COG4646 Location: 30060-32091 bp Feature: domain Description: COG4646 Location: 30060-32091 bp Feature: gene Location: 32627-32785 bp Feature: gene Location: 32789-34696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33113-33827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33113-33827 bp Feature: gene Location: 34856-35848 bp Feature: domain Description: COG4646 Location: 34871-35447 bp Feature: domain Description: COG4646 Location: 34871-35 447 bp Feature: domain Description: HELICc Location: 35474-35819 bp Feature: domain Description: HELICc Location: 35 474-35 819 bp Feature: gene Location: 35971-36165 bp Feature: gene Location: 36398-37108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36662-37037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36662-37037 bp Feature: gene Location: 37153-38055 bp Feature: domain Description: Phage_int_SAM_1 Location: 37162-37342 bp Feature: domain Description: Phage_int_SAM_1 Location: 37162-37342 bp Feature: domain Description: INT_RitC_C_like Location: 37423-37969 bp Feature: domain Description: INT_RitC_C_like Location: 37423-37969 bp Feature: gene Location: 38147-39130 bp Feature: domain Description: INT_RitB_C_like Location: 38483-39068 bp Feature: domain Description: INT_RitB_C_like Location: 38483-39068 bp Feature: gene Location: 39123-40358 bp Feature: domain Description: Phage_int_SAM_1 Location: 39477-39699 bp Feature: domain Description: Phage_int_SAM_1 Location: 39477-39699 bp Feature: domain Description: INT_RitA_C_like Location: 39792-40332 bp Feature: domain Description: INT_RitA_C_like Location: 39792-40332 bp Feature: gene Location: 40541-41686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40715-40958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40715 -4095 8 bp Feature: domain Description: Intron_maturas2 Location: 41030-41462 bp Feature: domain Description: Intron_maturas2 Location: 41030-41462 bp Feature: domain Description: HNHc Note: nucleases Location: 41513-41657 bp Feature: domain Description: HNHc Note: nucleases Location: 415 13-4165 7 bp Feature: gene Location: 41767-42699 bp Feature: domain Description: KOG1000 Location: 41794-41977 bp Feature: domain Description: KOG1000 Location: 41794-41977 bp Feature: gene Location: 42733-43344 bp Feature: domain Description: SpoVG Location: 42751-42997 bp Feature: domain Description: SpoVG Location: 4275 1-42997 bp Feature: domain Description: SpoVG Location: 43063-43294 bp Feature: domain Description: SpoVG Location: 43063-43294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, HELICc (smart00490), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188), Intron_maturas2 (pfam01348), HNHc (smart00507)
KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), SpoVG (pfam04026)

Seq: WWVO01000008.1 Blautia wexlerae strain BIOML-A3 scaffold8_size179701, whole genome shotgun sequence (179701 bp)
Overview 1 RT 1: 152-1920 bp Neighborhood of RT #1 [152, 1937] RVT-GII GIIM COG4586 RhaT Feature: gene Location: 152-712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-254 bp Feature: domain Description: GIIM Note: maturase Location: 320-539 bp Feature: domain Description: GIIM Note: maturase Location: 320-539 bp Feature: gene Location: 721-885 bp Feature: domain Description: COG4586 Location: 784-880 bp Feature: domain Description: COG4586 Location: 784-880 bp Feature: gene Location: 996-1937 bp Feature: domain Description: RhaT Location: 1020-1920 bp Feature: domain Description: RhaT Location: 1020-1920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4586 (ABC-type uncharacterized transport system, ATPase component ), RhaT (TIGR00776)