myRT

myRT report for GCA_009883045.1_ASM988304v1

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Seq: WWVN01000135.1 Blautia wexlerae strain BIOML-A4 scaffold135_size6305, whole genome shotgun sequence (6217 bp)
Overview 1 RT 1: 1100-6214 bp Neighborhood of RT #1 [1100, 6214] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII PRK13351 PRK13351 Feature: gene Location: 1100-2041 bp Feature: domain Description: INT_RitB_C_like Location: 1397-1976 bp Feature: domain Description: INT_RitB_C_like Location: 1 397-1 976 bp Feature: gene Location: 2073-3308 bp Feature: domain Description: Phage_int_SAM_1 Location: 2424-2661 bp Feature: domain Description: Phage_int_SAM_1 Location: 2424-2661 bp Feature: domain Description: INT_RitA_C_like Location: 2742-3273 bp Feature: domain Description: INT_RitA_C_like Location: 2742-3273 bp Feature: gene Location: 3478-3651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481-3649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481 -3649 bp Feature: gene Location: 3957-5876 bp Feature: domain Description: PRK13351 Location: 3960-4425 bp Feature: domain Description: PRK1 3351 Location: 3960-4425 bp Feature: domain Description: PRK13351 Location: 4482-5805 bp Feature: domain Description: PRK1 3351 Location: 4482-5805 bp Feature: gene Location: 6017-6214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, PRK13351 (elongation factor G-like protein)

Seq: WWVN01000013.1 Blautia wexlerae strain BIOML-A4 scaffold13_size90634, whole genome shotgun sequence (90634 bp)
Overview 1 RT 1: 28-2976 bp Neighborhood of RT #1 [28, 3041] RVT-GII GIIM Cupin_2 Sa_NUDIX Feature: gene Location: 28-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 83-970 bp Feature: domain Description: GIIM Note: maturase Location: 1051-1255 bp Feature: domain Description: GIIM Note: maturase Location: 1051-12 55 bp Feature: gene Location: 1473-2105 bp Feature: domain Description: Cupin_2 Location: 1644-1746 bp Feature: domain Description: Cupin_2 Location: 1644-1746 bp Feature: gene Location: 2148-3041 bp Feature: domain Description: Sa_NUDIX Location: 2382-2976 bp Feature: domain Description: Sa_NUDIX Location: 2 382 -2 976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Cupin_2 (pfam07883), Sa_NUDIX (pfam18167)

Seq: WWVN01000166.1 Blautia wexlerae strain BIOML-A4 scaffold166_size2080, whole genome shotgun sequence (1888 bp)
Overview 1 RT 1: 1-1614 bp Neighborhood of RT #1 [1, 1886] RVT-GII tspaseT_teng_C Feature: gene Location: 1-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: gene Location: 929-1123 bp Feature: gene Location: 1245-1886 bp Feature: domain Description: tspaseT_teng_C Location: 1398-1614 bp Feature: domain Description: tspaseT_teng_C Location: 13 98-1614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, tspaseT_teng_C (TIGR01766)

Seq: WWVN01000021.1 Blautia wexlerae strain BIOML-A4 scaffold21_size110167, whole genome shotgun sequence (109978 bp)
Overview 1 RT 1: 87-3681 bp Neighborhood of RT #1 [87, 4067] RVT-GII YodL LPD16 DUF4316 LPD25 Feature: gene Location: 87-833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 38-822 bp Feature: gene Location: 847-1059 bp Feature: gene Location: 1317-4067 bp Feature: domain Description: YodL Location: 2097-2391 bp Feature: domain Description: YodL Location: 2097-2391 bp Feature: domain Description: LPD16 Location: 2421-2643 bp Feature: domain Description: LPD16 Location: 24 21-264 3 bp Feature: domain Description: DUF4316 Location: 2691-2775 bp Feature: domain Description: DUF4 316 Location: 2691-2775 bp Feature: domain Description: LPD25 Location: 3384-3681 bp Feature: domain Description: LPD25 Location: 3384 -3681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840)

Seq: WWVN01000002.1 Blautia wexlerae strain BIOML-A4 scaffold2_size133061, whole genome shotgun sequence (133061 bp)
Overview 1 RT 1: 2242-18491 bp Neighborhood of RT #1 [2242, 18511] SpoVG SpoVG KOG1000 RVT-GII Intron_maturas2 HNHc Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII COG4646 HELICc RVT-GII N6_Mtase COG4646 Feature: gene Location: 2242-2853 bp Feature: domain Description: SpoVG Location: 2260-2506 bp Feature: domain Description: SpoVG Location: 2260-25 06 bp Feature: domain Description: SpoVG Location: 2572-2803 bp Feature: domain Description: SpoVG Location: 25 72-2803 bp Feature: gene Location: 2887-3819 bp Feature: domain Description: KOG1000 Location: 2914-3097 bp Feature: domain Description: KOG1000 Location: 2914-3097 bp Feature: gene Location: 3900-5045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4074-4317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4074-4317 bp Feature: domain Description: Intron_maturas2 Location: 4389-4821 bp Feature: domain Description: Intron_maturas2 Location: 4389-4821 bp Feature: domain Description: HNHc Note: nucleases Location: 4872-5016 bp Feature: domain Description: HNHc Note: nucleases Location: 4872-5 016 bp Feature: gene Location: 5228-6463 bp Feature: domain Description: Phage_int_SAM_1 Location: 5582-5804 bp Feature: domain Description: Phage_int_SAM_1 Location: 5 5 82-5 804 bp Feature: domain Description: INT_RitA_C_like Location: 5897-6437 bp Feature: domain Description: INT_RitA_C_like Location: 5 897-6437 bp Feature: gene Location: 6456-7439 bp Feature: domain Description: INT_RitB_C_like Location: 6792-7377 bp Feature: domain Description: INT_RitB_C_like Location: 6792-7377 bp Feature: gene Location: 7531-8433 bp Feature: domain Description: Phage_int_SAM_1 Location: 7540-7720 bp Feature: domain Description: Phage_int_SAM_1 Location: 75 40-7720 bp Feature: domain Description: INT_RitC_C_like Location: 7801-8347 bp Feature: domain Description: INT_RitC_C_like Location: 7801-8347 bp Feature: gene Location: 8478-9188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8742-9117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8742-9117 bp Feature: gene Location: 9421-9615 bp Feature: gene Location: 9738-10730 bp Feature: domain Description: COG4646 Location: 9753-10329 bp Feature: domain Description: COG4646 Location: 975 3-10329 bp Feature: domain Description: HELICc Location: 10356-10701 bp Feature: domain Description: HELICc Location: 1035 6-10701 bp Feature: gene Location: 10890-12797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11214-11928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11214-11928 bp Feature: gene Location: 12801-12959 bp Feature: gene Location: 13475-18511 bp Feature: domain Description: N6_Mtase Location: 15806-16433 bp Feature: domain Description: N6_Mtase Location: 15 806-16433 bp Feature: domain Description: COG4646 Location: 16460-18491 bp Feature: domain Description: COG4646 Location: 16460-18491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVG (pfam04026), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), COG4646 (Adenine-specific DNA methylase, N12 class )
HELICc (smart00490), N6_Mtase (pfam02384)