myRT

myRT report for GCA_009883065.1_ASM988306v1

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Seq: WWVS01000016.1 Blautia obeum strain BIOML-A1 scaffold16_size61251, whole genome shotgun sequence (61251 bp)
Overview 1 RT 1: 27030-34586 bp Neighborhood of RT #1 [27030, 34645] Maff2 VirD4 RVT-GII RVT-GII VirD4 Feature: gene Location: 27030-27245 bp Feature: domain Description: Maff2 Location: 27033-27240 bp Feature: domain Description: Maff2 Location: 27033-27240 bp Feature: gene Location: 27374-28432 bp Feature: domain Description: VirD4 Location: 27509-28310 bp Feature: domain Description: VirD4 Location: 27509-2831 0 bp Feature: gene Location: 28579-30486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28909-29653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28909-29653 bp Feature: gene Location: 30509-30754 bp Feature: gene Location: 31445-33316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31757-32501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 757-32501 bp Feature: gene Location: 33474-33794 bp Feature: gene Location: 33944-34645 bp Feature: domain Description: VirD4 Location: 34199-34586 bp Feature: domain Description: VirD4 Location: 341 99-34586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), VirD4 (COG3505), RVT-GII

Seq: WWVS01000003.1 Blautia obeum strain BIOML-A1 scaffold3_size304223, whole genome shotgun sequence (304103 bp)
Overview 1 RT 1: 247722-250783 bp Neighborhood of RT #1 [247722, 250783] BID_2 RVT-GII GIIM Feature: gene Location: 247722-248372 bp Feature: domain Description: BID_2 Location: 247806-248010 bp Feature: domain Description: BID_2 Location: 2 47806-2 48010 bp Feature: gene Location: 248696-248854 bp Feature: gene Location: 248992-249897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249283-249880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 492 83-2 49880 bp Feature: gene Location: 249994-250278 bp Feature: domain Description: GIIM Note: maturase Location: 249997-250213 bp Feature: domain Description: GIIM Note: maturase Location: 2 49997-2 502 13 bp Feature: gene Location: 250574-250783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BID_2 (smart00635), RVT-GII, GIIM (pfam08388)

Seq: WWVS01000005.1 Blautia obeum strain BIOML-A1 scaffold5_size208135, whole genome shotgun sequence (208135 bp)
Overview 1 RT 1: 193770-199875 bp Neighborhood of RT #1 [193770, 199919] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT-GII VirD4 DUF3801 Feature: gene Location: 193770-195881 bp Feature: domain Description: SR_TndX_transposase Location: 194019-194448 bp Feature: domain Description: SR_TndX_transposase Location: 194019-194448 bp Feature: domain Description: Recombinase Location: 194544-194904 bp Feature: domain Description: Recombinase Location: 194544-194904 bp Feature: domain Description: Zn_ribbon_recom Location: 194949-195135 bp Feature: domain Description: Zn_ribbon_recom Location: 194949-19513 5 bp Feature: domain Description: DUF4368 Location: 195411-195606 bp Feature: domain Description: DUF43 68 Location: 195411-195606 bp Feature: gene Location: 195922-196077 bp Feature: gene Location: 196101-198011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196431-197175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19643 1-197175 bp Feature: gene Location: 198637-199440 bp Feature: domain Description: VirD4 Location: 198850-199378 bp Feature: domain Description: VirD4 Location: 198850-1993 78 bp Feature: gene Location: 199437-199919 bp Feature: domain Description: DUF3801 Location: 199512-199875 bp Feature: domain Description: DUF3 801 Location: 199512-199875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)