myRT

myRT report for GCA_009883115.1_ASM988311v1

Download annotations/find similar RTs

Seq: WWVP01000013.1 Blautia wexlerae strain BIOML-A2 scaffold13_size91099, whole genome shotgun sequence (91181 bp)
Overview 1 RT 1: 263-3523 bp Neighborhood of RT #1 [263, 3588] RVT-GII GIIM Cupin_2 Sa_NUDIX Feature: gene Location: 263-406 bp Feature: gene Location: 415-660 bp Feature: gene Location: 575-1873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830-1517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830-1 51 7 bp Feature: domain Description: GIIM Note: maturase Location: 1598-1802 bp Feature: domain Description: GIIM Note: maturase Location: 1 598-1 802 bp Feature: gene Location: 2020-2652 bp Feature: domain Description: Cupin_2 Location: 2191-2293 bp Feature: domain Description: Cupin_2 Location: 21 91 -2293 bp Feature: gene Location: 2695-3588 bp Feature: domain Description: Sa_NUDIX Location: 2929-3523 bp Feature: domain Description: Sa_NUDIX Location: 2929-3523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Cupin_2 (pfam07883), Sa_NUDIX (pfam18167)

Seq: WWVP01000141.1 Blautia wexlerae strain BIOML-A2 scaffold141_size2848, whole genome shotgun sequence (2848 bp)
Overview 1 RT 1: 109-2845 bp Neighborhood of RT #1 [109, 2845] RVT-GII PRK13351 PRK13351 Feature: gene Location: 109-282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 -2 80 bp Feature: gene Location: 588-2507 bp Feature: domain Description: PRK13351 Location: 591-1056 bp Feature: domain Description: PRK13351 Location: 591-1056 bp Feature: domain Description: PRK13351 Location: 1113-2436 bp Feature: domain Description: PRK13351 Location: 1113-2 436 bp Feature: gene Location: 2648-2845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK13351 (elongation factor G-like protein)

Seq: WWVP01000166.1 Blautia wexlerae strain BIOML-A2 scaffold166_size1965, whole genome shotgun sequence (1866 bp)
Overview 1 RT 1: 1-1537 bp Neighborhood of RT #1 [1, 1537] RVT-GII Feature: gene Location: 1-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-589 bp Feature: gene Location: 929-1123 bp Feature: gene Location: 1394-1537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WWVP01000021.1 Blautia wexlerae strain BIOML-A2 scaffold21_size67865, whole genome shotgun sequence (67758 bp)
Overview 1 RT 1: 1406-7050 bp Neighborhood of RT #1 [1406, 7436] INT_RitB_C_like xerS INT_RitC_C_like RVT-GII YodL LPD16 DUF4316 LPD25 Feature: gene Location: 1406-2347 bp Feature: domain Description: INT_RitB_C_like Location: 1703-2282 bp Feature: domain Description: INT_RitB_C_like Location: 1703-2282 bp Feature: gene Location: 2334-3344 bp Feature: domain Description: xerS Location: 2370-2637 bp Feature: domain Description: xerS Location: 2370-2637 bp Feature: domain Description: INT_RitC_C_like Location: 2712-3264 bp Feature: domain Description: INT_RitC_C_like Location: 2712-3264 bp Feature: gene Location: 3456-4202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3807-4191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3807-4 191 bp Feature: gene Location: 4216-4428 bp Feature: gene Location: 4686-7436 bp Feature: domain Description: YodL Location: 5466-5760 bp Feature: domain Description: YodL Location: 54 66-5760 bp Feature: domain Description: LPD16 Location: 5790-6012 bp Feature: domain Description: LPD16 Location: 5790-6012 bp Feature: domain Description: DUF4316 Location: 6060-6144 bp Feature: domain Description: DUF4 316 Location: 6060-614 4 bp Feature: domain Description: LPD25 Location: 6753-7050 bp Feature: domain Description: LPD25 Location: 6753-7050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), xerS (PRK05084), INT_RitC_C_like (cd01182), RVT-GII, YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840)

Seq: WWVP01000006.1 Blautia wexlerae strain BIOML-A2 scaffold6_size132934, whole genome shotgun sequence (132967 bp)
Overview 1 RT 1: 2242-18491 bp Neighborhood of RT #1 [2242, 18511] SpoVG SpoVG KOG1000 RVT-GII Intron_maturas2 HNHc Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII COG4646 HELICc RVT-GII N6_Mtase COG4646 Feature: gene Location: 2242-2853 bp Feature: domain Description: SpoVG Location: 2260-2506 bp Feature: domain Description: SpoVG Location: 2260-25 06 bp Feature: domain Description: SpoVG Location: 2572-2803 bp Feature: domain Description: SpoVG Location: 25 72-2803 bp Feature: gene Location: 2887-3819 bp Feature: domain Description: KOG1000 Location: 2914-3097 bp Feature: domain Description: KOG1000 Location: 2914-3097 bp Feature: gene Location: 3900-5045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4074-4317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4074-4317 bp Feature: domain Description: Intron_maturas2 Location: 4389-4821 bp Feature: domain Description: Intron_maturas2 Location: 4389-4821 bp Feature: domain Description: HNHc Note: nucleases Location: 4872-5016 bp Feature: domain Description: HNHc Note: nucleases Location: 4872-5 016 bp Feature: gene Location: 5228-6463 bp Feature: domain Description: Phage_int_SAM_1 Location: 5582-5804 bp Feature: domain Description: Phage_int_SAM_1 Location: 5 5 82-5 804 bp Feature: domain Description: INT_RitA_C_like Location: 5897-6437 bp Feature: domain Description: INT_RitA_C_like Location: 5 897-6437 bp Feature: gene Location: 6456-7439 bp Feature: domain Description: INT_RitB_C_like Location: 6792-7377 bp Feature: domain Description: INT_RitB_C_like Location: 6792-7377 bp Feature: gene Location: 7531-8433 bp Feature: domain Description: Phage_int_SAM_1 Location: 7540-7720 bp Feature: domain Description: Phage_int_SAM_1 Location: 75 40-7720 bp Feature: domain Description: INT_RitC_C_like Location: 7801-8347 bp Feature: domain Description: INT_RitC_C_like Location: 7801-8347 bp Feature: gene Location: 8478-9188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8742-9117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8742-9117 bp Feature: gene Location: 9421-9615 bp Feature: gene Location: 9738-10730 bp Feature: domain Description: COG4646 Location: 9753-10329 bp Feature: domain Description: COG4646 Location: 975 3-10329 bp Feature: domain Description: HELICc Location: 10356-10701 bp Feature: domain Description: HELICc Location: 1035 6-10701 bp Feature: gene Location: 10890-12797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11214-11928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11214-11928 bp Feature: gene Location: 12801-12959 bp Feature: gene Location: 13475-18511 bp Feature: domain Description: N6_Mtase Location: 15806-16433 bp Feature: domain Description: N6_Mtase Location: 15 806-16433 bp Feature: domain Description: COG4646 Location: 16460-18491 bp Feature: domain Description: COG4646 Location: 16460-18491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVG (pfam04026), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), COG4646 (Adenine-specific DNA methylase, N12 class )
HELICc (smart00490), N6_Mtase (pfam02384)