myRT

myRT report for GCA_009885395.1_ASM988539v1

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Seq: VFKT01000201.1 Deltaproteobacteria bacterium isolate Bin_38_12 c_000000009673, whole genome shotgun sequence (1727 bp)
Overview 1 RT 1: 429-1071 bp Neighborhood of RT #1 [429, 1724] RVT-DGRs Feature: gene Location: 429-1724 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 432-1071 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 432-1 071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VFKT01000264.1 Deltaproteobacteria bacterium isolate Bin_38_12 c_000001445993, whole genome shotgun sequence (11483 bp)
Overview 1 RT 1: 3-4020 bp Neighborhood of RT #1 [3, 4020] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 3-401 bp Feature: domain Description: DUF1566 Location: 6-390 bp Feature: domain Description: DUF1566 Location: 6-390 bp Feature: gene Location: 497-937 bp Feature: domain Description: Avd_like Location: 524-833 bp Feature: domain Description: Avd_like Location: 52 4-833 bp Feature: gene Location: 1347-2873 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1461-2187 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1461-2 187 bp Feature: gene Location: 3185-3661 bp Feature: gene Location: 3709-4020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF1566 (pfam07603), Avd_like (cd16376)

Seq: VFKT01000022.1 Deltaproteobacteria bacterium isolate Bin_38_12 c_000001979895, whole genome shotgun sequence (2785 bp)
Overview 1 RT 1: 3-2230 bp Neighborhood of RT #1 [3, 2784] RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 3-158 bp Feature: gene Location: 249-401 bp Feature: gene Location: 444-1196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 531-819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 1-819 bp Feature: domain Description: GIIM Note: maturase Location: 891-1110 bp Feature: domain Description: GIIM Note: maturase Location: 891-1110 bp Feature: gene Location: 1087-2784 bp Feature: domain Description: Resolvase Location: 1096-1534 bp Feature: domain Description: Resolvase Location: 1096-153 4 bp Feature: domain Description: Recombinase Location: 1624-1987 bp Feature: domain Description: Recombinase Location: 1624-1987 bp Feature: domain Description: Zn_ribbon_recom Location: 2029-2230 bp Feature: domain Description: Zn_ribbon_recom Location: 2029-223 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388)