myRT

myRT report for GCA_009885545.1_ASM988554v1

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Seq: VFKM01000134.1 Flavobacteriales bacterium isolate Bin_61_26 c_000000438452, whole genome shotgun sequence (5500 bp)
Overview 1 RT 1: 683-4357 bp Neighborhood of RT #1 [683, 5232] R1-I-EN RVT-GII AIR1 Feature: gene Location: 683-3577 bp Feature: domain Description: R1-I-EN Location: 728-1358 bp Feature: domain Description: R1 -I-EN Location: 728-1 358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2243-2852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2243-2852 bp Feature: gene Location: 3646-5232 bp Feature: domain Description: AIR1 Location: 4225-4357 bp Feature: domain Description: AIR1 Location: 4225-4357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII, AIR1 (COG5082)

Seq: VFKM01000023.1 Flavobacteriales bacterium isolate Bin_61_26 c_000002496058, whole genome shotgun sequence (15513 bp)
Overview 1 RT 1: 3143-10790 bp Neighborhood of RT #1 [3143, 10790] DUF4145 HsdR DEXSc_RecD-like recD_rel RVT-Retrons Feature: gene Location: 3143-6628 bp Feature: domain Description: DUF4145 Location: 3206-3458 bp Feature: domain Description: DUF4145 Location: 32 06-3458 bp Feature: domain Description: HsdR Location: 3788-6569 bp Feature: domain Description: HsdR Location: 3788-6569 bp Feature: gene Location: 6721-8052 bp Feature: domain Description: DEXSc_RecD-like Location: 6805-7270 bp Feature: domain Description: DEXSc_RecD-like Location: 6805-72 70 bp Feature: domain Description: recD_rel Location: 7909-8032 bp Feature: domain Description: recD_rel Location: 7909-8032 bp Feature: gene Location: 8222-9217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8450-9014 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8450-9014 bp Feature: gene Location: 9219-10199 bp Feature: gene Location: 10329-10790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4145 (pfam13643), HsdR (COG4096), DEXSc_RecD-like (cd17933), recD_rel (TIGR01448), RVT-Retrons

Seq: VFKM01000197.1 Flavobacteriales bacterium isolate Bin_61_26 c_000004952850, whole genome shotgun sequence (4916 bp)
Overview 1 RT 1: 769-4579 bp Neighborhood of RT #1 [769, 4821] R1-I-EN RVT-CRISPR-like AIR1 Feature: gene Location: 769-3657 bp Feature: domain Description: R1-I-EN Location: 844-1444 bp Feature: domain Description: R1-I-EN Location: 844-1444 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2353-2992 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 23 53 -2992 bp Feature: gene Location: 3703-4821 bp Feature: domain Description: AIR1 Location: 4393-4579 bp Feature: domain Description: AIR1 Location: 43 93 -4579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-CRISPR, AIR1 (COG5082)