myRT

myRT report for GCA_009885955.1_ASM988595v1

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Seq: VFJS01000024.1 Spirochaetia bacterium isolate Bin_56_1 c_000000313294, whole genome shotgun sequence (16029 bp)
Overview 1 RT 1: 8246-14142 bp Neighborhood of RT #1 [8246, 14423] TIGR00275 RVT-GII GIIM HEAT_2 HEAT_2 Feature: gene Location: 8246-9178 bp Feature: gene Location: 9281-10507 bp Feature: domain Description: TIGR00275 Location: 9308-10499 bp Feature: domain Description: TIGR00275 Location: 9308-1 0499 bp Feature: gene Location: 11018-12496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11468-12119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 468-1 21 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 12191-12410 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 91 -1 241 0 bp Feature: gene Location: 12653-12859 bp Feature: gene Location: 13527-14423 bp Feature: domain Description: HEAT_2 Location: 13737-13809 bp Feature: domain Description: HEAT_2 Location: 1 3737-1 3809 bp Feature: domain Description: HEAT_2 Location: 13977-14142 bp Feature: domain Description: HEAT_2 Location: 1 3977-1 41 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HEAT_2 (pfam13646), TIGR00275 (flavoprotein, HI0933 family)

Seq: VFJS01000044.1 Spirochaetia bacterium isolate Bin_56_1 c_000001087786, whole genome shotgun sequence (3643 bp)
Overview 1 RT 1: 3-3491 bp Neighborhood of RT #1 [3, 3514] Zn_Tnp_IS91 INT_IntI_C RVT-GII ParE_toxin Feature: gene Location: 3-335 bp Feature: domain Description: Zn_Tnp_IS91 Location: 54-285 bp Feature: domain Description: Zn_Tnp_IS91 Location: 54-2 85 bp Feature: gene Location: 339-974 bp Feature: domain Description: INT_IntI_C Location: 423-921 bp Feature: domain Description: INT_IntI_C Location: 42 3-92 1 bp Feature: gene Location: 1541-2578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1796-2465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1796-2 465 bp Feature: gene Location: 2716-2967 bp Feature: gene Location: 3212-3514 bp Feature: domain Description: ParE_toxin Location: 3224-3491 bp Feature: domain Description: ParE_toxin Location: 32 2 4-3491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ParE_toxin (pfam05016), Zn_Tnp_IS91 (pfam14319), INT_IntI_C (cd01193)

Seq: VFJS01000092.1 Spirochaetia bacterium isolate Bin_56_1 c_000001501568, whole genome shotgun sequence (5808 bp)
Overview 1 RT 1: 67-2467 bp Neighborhood of RT #1 [67, 2467] RVT-GII Feature: gene Location: 67-1269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-901 bp Feature: gene Location: 1362-1781 bp Feature: gene Location: 1958-2467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VFJS01000056.1 Spirochaetia bacterium isolate Bin_56_1 c_000002109173, whole genome shotgun sequence (105395 bp)
Overview 1 RT 1: 100743-102432 bp Neighborhood of RT #1 [100743, 102449] RVT-GII prismane_assoc Cons_hypoth95 Feature: gene Location: 100743-100907 bp Feature: gene Location: 100938-101078 bp Feature: gene Location: 101282-101428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101285-101348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101285-10134 8 bp Feature: gene Location: 101653-101850 bp Feature: domain Description: prismane_assoc Location: 101662-101833 bp Feature: domain Description: prismane_assoc Location: 101662-101833 bp Feature: gene Location: 101862-102449 bp Feature: domain Description: Cons_hypoth95 Location: 101874-102432 bp Feature: domain Description: Cons_hypoth95 Location: 101874 -1024 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, prismane_assoc (TIGR03980), Cons_hypoth95 (pfam03602)

Seq: VFJS01000013.1 Spirochaetia bacterium isolate Bin_56_1 c_000002608506, whole genome shotgun sequence (19789 bp)
Overview 1 RT 1: 17501-19698 bp Neighborhood of RT #1 [17501, 19787] NT_KNTase_like COG1708 RVT-GII GIIM Feature: gene Location: 17501-17827 bp Feature: domain Description: NT_KNTase_like Location: 17531-17720 bp Feature: domain Description: NT_KNTase_like Location: 175 31-17720 bp Feature: gene Location: 18367-18687 bp Feature: domain Description: COG1708 Location: 18391-18673 bp Feature: domain Description: COG1708 Location: 18391-18673 bp Feature: gene Location: 18819-19787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18822-19410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18822-19410 bp Feature: domain Description: GIIM Note: maturase Location: 19485-19698 bp Feature: domain Description: GIIM Note: maturase Location: 19485 -19698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NT_KNTase_like (cd05403), COG1708 (Predicted nucleotidyltransferase ), RVT-GII, GIIM (pfam08388)

Seq: VFJS01000015.1 Spirochaetia bacterium isolate Bin_56_1 c_000002774175, whole genome shotgun sequence (1387 bp)
Overview 1 RT 1: 143-1172 bp Neighborhood of RT #1 [143, 1261] RVT-GII GIIM Feature: gene Location: 143-1261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 3-887 bp Feature: domain Description: GIIM Note: maturase Location: 959-1172 bp Feature: domain Description: GIIM Note: maturase Location: 959-1172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)