myRT

myRT report for GCA_009887405.1_ASM988740v1

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Seq: WXZO01000018.1 Klebsiella pneumoniae strain CIP 53153 ref53153_S39_R1_(paired)_contig_18, whole genome shotgun sequence (93153 bp)
Overview 1 RT 1: 45141-52310 bp Neighborhood of RT #1 [45141, 52327] EAL RVT-UG4 FimD FimC Feature: gene Location: 45141-45347 bp Feature: gene Location: 45437-46291 bp Feature: domain Description: EAL Location: 46121-46274 bp Feature: domain Description: EAL Location: 461 21 -46274 bp Feature: gene Location: 46928-48958 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47336-47780 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47336-47780 bp Feature: gene Location: 48958-51567 bp Feature: domain Description: FimD Location: 49015-51556 bp Feature: domain Description: FimD Location: 4901 5-51 556 bp Feature: gene Location: 51599-52327 bp Feature: domain Description: FimC Location: 51647-52310 bp Feature: domain Description: FimC Location: 51 647-5231 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: WXZO01000052.1 Klebsiella pneumoniae strain CIP 53153 ref53153_S39_R1_(paired)_contig_52, whole genome shotgun sequence (75509 bp)
Overview 1 RT 1: 21210-25062 bp Neighborhood of RT #1 [21210, 25062] umuC PRK10276 RVT-GII Feature: gene Location: 21210-22475 bp Feature: domain Description: umuC Location: 21213-22473 bp Feature: domain Description: umuC Location: 2 12 13-2 2 473 bp Feature: gene Location: 22478-22897 bp Feature: domain Description: PRK10276 Location: 22481-22892 bp Feature: domain Description: PRK102 76 Location: 2 2 481-2 2 892 bp Feature: gene Location: 22976-24460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23378-24068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3378-2 4068 bp Feature: gene Location: 24514-24747 bp Feature: gene Location: 24916-25062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII