myRT

myRT report for GCA_009889765.1_ASM988976v1

Download annotations/find similar RTs

Seq: JRLA01000042.1 Escherichia coli strain UMNturkey2 contig_42, whole genome shotgun sequence (63920 bp)
Overview 1 RT 1: 271-9174 bp Neighborhood of RT #1 [271, 9176] Ail_Lom phage_tail_N 7tmA_amine_R-like Peptidase_S74 APC_N_CC RVT-UG17 SLATT_5 prfC Feature: gene Location: 271-870 bp Feature: domain Description: Ail_Lom Location: 274-868 bp Feature: domain Description: Ail_Lom Location: 274-868 bp Feature: gene Location: 935-4711 bp Feature: domain Description: phage_tail_N Location: 938-1337 bp Feature: domain Description: phage_tail_N Location: 938-1 337 bp Feature: domain Description: 7tmA_amine_R-like Location: 1751-3131 bp Feature: domain Description: 7tmA_amine_R-like Location: 1 751 -31 31 bp Feature: domain Description: Peptidase_S74 Location: 4280-4427 bp Feature: domain Description: Peptidase_S74 Location: 4280-4427 bp Feature: domain Description: APC_N_CC Location: 4580-4703 bp Feature: domain Description: APC_N_CC Location: 4580-4703 bp Feature: gene Location: 5007-6377 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5235-5841 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 5235-5841 bp Feature: gene Location: 6355-7059 bp Feature: domain Description: SLATT_5 Location: 6517-7027 bp Feature: domain Description: SLATT_5 Location: 651 7-7027 bp Feature: gene Location: 7590-9176 bp Feature: domain Description: prfC Location: 7608-9174 bp Feature: domain Description: prfC Location: 7608-91 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), 7tmA_amine_R-like (cd14967), Peptidase_S74 (pfam13884), APC_N_CC (pfam16689), RVT-UG17, SLATT_5 (pfam18160), prfC (TIGR00503)

Seq: JRLA01000046.1 Escherichia coli strain UMNturkey2 contig_47, whole genome shotgun sequence (16024 bp)
Overview 1 RT 1: 7721-11610 bp Neighborhood of RT #1 [7721, 11615] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 7721-8035 bp Feature: gene Location: 8433-8630 bp Feature: gene Location: 8799-9233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8991-9207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8991-92 07 bp Feature: gene Location: 9206-9859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9209-9617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 09-9617 bp Feature: domain Description: GIIM Note: maturase Location: 9665-9857 bp Feature: domain Description: GIIM Note: maturase Location: 9665-9857 bp Feature: gene Location: 10235-10453 bp Feature: gene Location: 10584-11615 bp Feature: domain Description: LacI Location: 10626-10761 bp Feature: domain Description: LacI Location: 1062 6-10761 bp Feature: domain Description: PBP1_GntR Location: 10800-11610 bp Feature: domain Description: PBP1_GntR Location: 10800-11610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)