myRT

myRT report for GCA_009890725.1_ASM989072v1

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Seq: WXOO01000001.1 Enterococcus raffinosus strain BIOML-A1 scaffold1_size480457, whole genome shotgun sequence (480481 bp)
Overview 1 RT 1: 452750-458290 bp Neighborhood of RT #1 [452750, 458316] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 452750-453094 bp Feature: domain Description: RelB_DinJ Location: 452960-453086 bp Feature: domain Description: RelB_DinJ Location: 452960-453086 bp Feature: gene Location: 453148-454179 bp Feature: domain Description: FtsK_SpoIIIE Location: 453820-454060 bp Feature: domain Description: FtsK_SpoIIIE Location: 453820-454060 bp Feature: gene Location: 454773-456647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455139-455835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4551 39-455835 bp Feature: domain Description: HNHc Note: nucleases Location: 456375-456534 bp Feature: domain Description: HNHc Note: nucleases Location: 456375-456534 bp Feature: gene Location: 456749-457129 bp Feature: domain Description: FtsK Location: 456764-457004 bp Feature: domain Description: FtsK Location: 456764-457004 bp Feature: gene Location: 457174-458316 bp Feature: domain Description: Dcm Location: 457177-458290 bp Feature: domain Description: Dcm Location: 4571 77-458290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: WXOO01000046.1 Enterococcus raffinosus strain BIOML-A1 scaffold46_size11864, whole genome shotgun sequence (11864 bp)
Overview 1 RT 1: 2277-9459 bp Neighborhood of RT #1 [2277, 9459] RVT-GII HNHc AAA_10 Feature: gene Location: 2277-3536 bp Feature: gene Location: 3539-3688 bp Feature: gene Location: 4214-5920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4511-5210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4511-52 10 bp Feature: domain Description: HNHc Note: nucleases Location: 5765-5903 bp Feature: domain Description: HNHc Note: nucleases Location: 5765-5903 bp Feature: gene Location: 6051-7331 bp Feature: domain Description: AAA_10 Location: 6213-7296 bp Feature: domain Description: AAA_10 Location: 62 13-72 96 bp Feature: gene Location: 7336-9459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), AAA_10 (pfam12846)

Seq: WXOO01000047.1 Enterococcus raffinosus strain BIOML-A1 scaffold47_size11738, whole genome shotgun sequence (11738 bp)
Overview 1 RT 1: 6869-10387 bp Neighborhood of RT #1 [6869, 10422] Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like YitT_membrane RVT-GII KOG4768 Relaxase Feature: gene Location: 6869-8011 bp Feature: domain Description: Arm-DNA-bind_4 Location: 6914-7043 bp Feature: domain Description: Arm-DNA-bind_4 Location: 6914-7043 bp Feature: domain Description: Phage_int_SAM_3 Location: 7070-7238 bp Feature: domain Description: Phage_int_SAM_3 Location: 7070-723 8 bp Feature: domain Description: INT_ICEBs1_C_like Location: 7427-7955 bp Feature: domain Description: INT_ICEBs1_C_like Location: 7427-7955 bp Feature: gene Location: 8490-8618 bp Feature: domain Description: YitT_membrane Location: 8520-8613 bp Feature: domain Description: YitT_membrane Location: 8520-8613 bp Feature: gene Location: 8679-9341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8763-9204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8763 -9204 bp Feature: gene Location: 9256-9528 bp Feature: domain Description: KOG4768 Location: 9280-9481 bp Feature: domain Description: KOG4768 Location: 9280-9481 bp Feature: gene Location: 10060-10422 bp Feature: domain Description: Relaxase Location: 10090-10387 bp Feature: domain Description: Relaxase Location: 10090-103 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), YitT_membrane (pfam02588), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )