myRT

myRT report for GCA_009891525.1_ASM989152v1

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Seq: WXSL01000055.1 Enterococcus faecium strain BIOML-A2 scaffold129_size2508, whole genome shotgun sequence (2508 bp)
Overview 1 RT 1: 126-2467 bp Neighborhood of RT #1 [126, 2467] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 126-1937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1 21 2 bp Feature: domain Description: Intron_maturas2 Location: 1401-1611 bp Feature: domain Description: Intron_maturas2 Location: 1 401 -1 61 1 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1866 bp Feature: domain Description: HNHc Note: nucleases Location: 1 761 -1 866 bp Feature: gene Location: 2117-2467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WXSL01000028.1 Enterococcus faecium strain BIOML-A2 scaffold62_size45074, whole genome shotgun sequence (45074 bp)
Overview 1 RT 1: 3-5960 bp Neighborhood of RT #1 [3, 6028] RVT_N RVT-GII GIIM PRK13351 Feature: gene Location: 3-140 bp Feature: gene Location: 460-2178 bp Feature: domain Description: RVT_N Location: 565-808 bp Feature: domain Description: RVT_N Location: 565-808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1501 bp Feature: domain Description: GIIM Note: maturase Location: 1555-1786 bp Feature: domain Description: GIIM Note: maturase Location: 1555-1786 bp Feature: gene Location: 2132-3445 bp Feature: gene Location: 4103-6028 bp Feature: domain Description: PRK13351 Location: 4106-5960 bp Feature: domain Description: PRK13351 Location: 4106-5960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK13351 (elongation factor G-like protein)

Seq: WXSL01000041.1 Enterococcus faecium strain BIOML-A2 scaffold82_size21013, whole genome shotgun sequence (21013 bp)
Overview 1 RT 1: 16245-19379 bp Neighborhood of RT #1 [16245, 19379] RVT-UG27 Feature: gene Location: 16245-16394 bp Feature: gene Location: 16791-17033 bp Feature: gene Location: 17328-18599 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 17526-18162 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 17526-18162 bp Feature: gene Location: 18722-18991 bp Feature: gene Location: 18993-19379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27