myRT

myRT report for GCA_009896485.1_ASM989648v1

Download annotations/find similar RTs

Seq: SHDR01000016.1 Staphylococcus aureus strain APC 3815 NODE_16_length_27386_cov_11.8549, whole genome shotgun sequence (27386 bp)
Overview 1 RT 1: 1304-7258 bp Neighborhood of RT #1 [1304, 7284] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 1304-1912 bp Feature: gene Location: 2453-3043 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2927-3026 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2927-3026 bp Feature: gene Location: 3130-4221 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3133-3313 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 31 33-331 3 bp Feature: gene Location: 4575-5420 bp Feature: domain Description: PenP Location: 4581-5412 bp Feature: domain Description: PenP Location: 4581 -541 2 bp Feature: gene Location: 5509-7284 bp Feature: domain Description: MecR1 Location: 5527-6559 bp Feature: domain Description: MecR1 Location: 5527-6559 bp Feature: domain Description: Transpeptidase Location: 6613-7258 bp Feature: domain Description: Transpeptidase Location: 661 3-7258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: SHDR01000009.1 Staphylococcus aureus strain APC 3815 NODE_9_length_129935_cov_32.7882, whole genome shotgun sequence (129935 bp)
Overview 1 RT 1: 8165-15123 bp Neighborhood of RT #1 [8165, 15140] PRK08617 RVT-Retrons DnaC Feature: gene Location: 8165-9829 bp Feature: domain Description: PRK08617 Location: 8174-9821 bp Feature: domain Description: PRK08617 Location: 8174-982 1 bp Feature: gene Location: 10127-10351 bp Feature: gene Location: 11079-12095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11229-11766 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 112 2 9-11766 bp Feature: gene Location: 12340-13617 bp Feature: gene Location: 14868-15140 bp Feature: domain Description: DnaC Location: 14898-15123 bp Feature: domain Description: DnaC Location: 14898-1512 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons, DnaC (COG1484)