myRT

myRT report for GCA_009896805.1_ASM989680v1

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Seq: SHEE01000016.1 Staphylococcus aureus strain APC 3885 NODE_16_length_27388_cov_10.0964, whole genome shotgun sequence (27388 bp)
Overview 1 RT 1: 15876-23476 bp Neighborhood of RT #1 [15876, 23502] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 15876-16040 bp Feature: gene Location: 17521-18129 bp Feature: gene Location: 18671-19261 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 19145-19244 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 91 45-1 9244 bp Feature: gene Location: 19348-20439 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 19351-19531 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 9351 -1 9531 bp Feature: gene Location: 20793-21638 bp Feature: domain Description: PenP Location: 20799-21630 bp Feature: domain Description: PenP Location: 20799-21 630 bp Feature: gene Location: 21703-23502 bp Feature: domain Description: MecR1 Location: 21745-22777 bp Feature: domain Description: MecR1 Location: 21 745-22777 bp Feature: domain Description: Transpeptidase Location: 22831-23476 bp Feature: domain Description: Transpeptidase Location: 22831 -23476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: SHEE01000004.1 Staphylococcus aureus strain APC 3885 NODE_4_length_242112_cov_34.1991, whole genome shotgun sequence (242112 bp)
Overview 1 RT 1: 44060-51018 bp Neighborhood of RT #1 [44060, 51035] PRK08617 RVT-Retrons DnaC Feature: gene Location: 44060-45724 bp Feature: domain Description: PRK08617 Location: 44069-45716 bp Feature: domain Description: PRK08617 Location: 44069-45716 bp Feature: gene Location: 46022-46246 bp Feature: gene Location: 46974-47990 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47124-47661 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4712 4-47661 bp Feature: gene Location: 48235-49512 bp Feature: gene Location: 50763-51035 bp Feature: domain Description: DnaC Location: 50793-51018 bp Feature: domain Description: DnaC Location: 50793-51018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons, DnaC (COG1484)