myRT

myRT report for GCA_009896835.1_ASM989683v1

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Seq: SHED01000015.1 Staphylococcus aureus strain APC 3886 NODE_15_length_27388_cov_30.9645, whole genome shotgun sequence (27388 bp)
Overview 1 RT 1: 10771-18371 bp Neighborhood of RT #1 [10771, 18397] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 10771-10935 bp Feature: gene Location: 12416-13024 bp Feature: gene Location: 13566-14156 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 14040-14139 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 4040-1 41 39 bp Feature: gene Location: 14243-15334 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 14246-14426 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 4246-1 4426 bp Feature: gene Location: 15688-16533 bp Feature: domain Description: PenP Location: 15694-16525 bp Feature: domain Description: PenP Location: 1 5694-1 6525 bp Feature: gene Location: 16598-18397 bp Feature: domain Description: MecR1 Location: 16640-17672 bp Feature: domain Description: MecR1 Location: 1 6640-1 7672 bp Feature: domain Description: Transpeptidase Location: 17726-18371 bp Feature: domain Description: Transpeptidase Location: 1 7726-1 8371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: SHED01000005.1 Staphylococcus aureus strain APC 3886 NODE_5_length_242112_cov_41.7072, whole genome shotgun sequence (242112 bp)
Overview 1 RT 1: 44060-51018 bp Neighborhood of RT #1 [44060, 51035] PRK08617 RVT-Retrons DnaC Feature: gene Location: 44060-45724 bp Feature: domain Description: PRK08617 Location: 44069-45716 bp Feature: domain Description: PRK08617 Location: 44069-45716 bp Feature: gene Location: 46022-46246 bp Feature: gene Location: 46974-47990 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47124-47661 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4712 4-47661 bp Feature: gene Location: 48235-49512 bp Feature: gene Location: 50763-51035 bp Feature: domain Description: DnaC Location: 50793-51018 bp Feature: domain Description: DnaC Location: 50793-51018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons, DnaC (COG1484)