myRT

myRT report for GCA_009898525.1_ASM989852v1

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Seq: QXEX01000020.1 Escherichia coli strain E7 NODE_20_length_95064_cov_383.382, whole genome shotgun sequence (95064 bp)
Overview 1 RT 1: 52758-56639 bp Neighborhood of RT #1 [52758, 56644] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 52758-53216 bp Feature: domain Description: dut Location: 52764-53211 bp Feature: domain Description: dut Location: 52764-5321 1 bp Feature: gene Location: 53323-53919 bp Feature: domain Description: slmA Location: 53329-53905 bp Feature: domain Description: slmA Location: 53329-53905 bp Feature: gene Location: 53965-54924 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54100-54649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 541 00-54649 bp Feature: gene Location: 55222-55878 bp Feature: domain Description: pyrE Location: 55240-55873 bp Feature: domain Description: pyrE Location: 55240-55873 bp Feature: gene Location: 55928-56644 bp Feature: domain Description: rph Location: 55931-56639 bp Feature: domain Description: rph Location: 55931 -56639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: QXEX01000007.1 Escherichia coli strain E7 NODE_7_length_173591_cov_310.12, whole genome shotgun sequence (173591 bp)
Overview 1 RT 1: 12804-19314 bp Neighborhood of RT #1 [12804, 19571] AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 12804-13118 bp Feature: gene Location: 13657-15933 bp Feature: domain Description: AAA_15 Location: 13690-14698 bp Feature: domain Description: AAA_15 Location: 13690-14698 bp Feature: gene Location: 16048-17148 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16231-16759 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162 31-16759 bp Feature: gene Location: 17804-18922 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 18575-18746 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 18575-18746 bp Feature: gene Location: 19095-19571 bp Feature: domain Description: HTH_23 Location: 19173-19314 bp Feature: domain Description: HTH_2 3 Location: 19173-19314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384)