myRT

myRT report for GCA_009898855.1_ASM989885v1

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Seq: WJPH01000015.1 Halomonas sp. MG34 NODE_16_length_51522_cov_87.908843, whole genome shotgun sequence (51522 bp)
Overview 1 RT 1: 2563-5936 bp Neighborhood of RT #1 [2563, 5944] HTH_21 RVT-GII PRK08195 PRK08300 Feature: gene Location: 2563-2958 bp Feature: domain Description: HTH_21 Location: 2749-2866 bp Feature: domain Description: HTH_21 Location: 2749-2866 bp Feature: gene Location: 3098-3259 bp Feature: gene Location: 3451-3834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3472-3829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3472-3829 bp Feature: gene Location: 4012-5031 bp Feature: domain Description: PRK08195 Location: 4021-5023 bp Feature: domain Description: PRK081 95 Location: 4021 -5023 bp Feature: gene Location: 5048-5944 bp Feature: domain Description: PRK08300 Location: 5054-5936 bp Feature: domain Description: PRK08300 Location: 5054-5936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, PRK08195 (4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated), PRK08300 (acetaldehyde dehydrogenase; Validated)

Seq: WJPH01000004.1 Halomonas sp. MG34 NODE_5_length_489060_cov_82.938401, whole genome shotgun sequence (489060 bp)
Overview 1 RT 1: 34248-41327 bp 2 RT 2: 142645-147816 bp Neighborhood of RT #1 [34248, 41327] RVT-UG5 HTH_31 Neighborhood of RT #2 [142645, 147816] YuiF TrmJ RVT_N RVT-GII GIIM HNH Feature: gene Location: 34248-34859 bp Feature: gene Location: 34891-36099 bp Feature: gene Location: 36392-39355 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 36884-37349 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 36884-37349 bp Feature: gene Location: 39943-40092 bp Feature: domain Description: HTH_31 Location: 39967-40087 bp Feature: domain Description: HTH_31 Location: 39967-40087 bp Feature: gene Location: 40179-41327 bp Feature: gene Location: 142645-143994 bp Feature: domain Description: YuiF Location: 142648-143992 bp Feature: domain Description: YuiF Location: 142 648-143992 bp Feature: gene Location: 144061-144873 bp Feature: domain Description: TrmJ Location: 144145-144865 bp Feature: domain Description: TrmJ Location: 144145-144865 bp Feature: gene Location: 145377-147098 bp Feature: domain Description: RVT_N Location: 145482-145719 bp Feature: domain Description: RVT_N Location: 145482 -145719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145770-146415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145770-146415 bp Feature: domain Description: GIIM Note: maturase Location: 146469-146700 bp Feature: domain Description: GIIM Note: maturase Location: 146469-146700 bp Feature: domain Description: HNH Note: nucleases Location: 146940-147078 bp Feature: domain Description: HNH Note: nucleases Location: 146940-147078 bp Feature: gene Location: 147182-147400 bp Feature: gene Location: 147634-147816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, HTH_31 (pfam13560), YuiF (COG2056), TrmJ (COG0565), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)