myRT

myRT report for GCA_009898995.1_ASM989899v1

Download annotations/find similar RTs

Seq: VTMJ01000047.1 Escherichia coli strain 45277 45277_S23-contig_47, whole genome shotgun sequence (47483 bp)
Overview 1 RT 1: 5144-10471 bp Neighborhood of RT #1 [5144, 10479] PRK10597 RVT-Retrons TIR_2 Peptidase_S74 APC_N_CC Feature: gene Location: 5144-5404 bp Feature: domain Description: PRK10597 Location: 5147-5387 bp Feature: domain Description: PRK1 0597 Location: 51 47-5387 bp Feature: gene Location: 5762-6124 bp Feature: gene Location: 6208-7365 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6211-6643 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 621 1 -6643 bp Feature: domain Description: TIR_2 Location: 6970-7303 bp Feature: domain Description: TIR_2 Location: 6970-7303 bp Feature: gene Location: 7695-7868 bp Feature: gene Location: 7993-10479 bp Feature: domain Description: Peptidase_S74 Location: 10048-10195 bp Feature: domain Description: Peptidase_S74 Location: 1 0048-1 01 95 bp Feature: domain Description: APC_N_CC Location: 10348-10471 bp Feature: domain Description: APC_N_CC Location: 1 0348-1 0471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), Peptidase_S74 (pfam13884), APC_N_CC (pfam16689)

Seq: VTMJ01000092.1 Escherichia coli strain 45277 45277_S23-contig_92, whole genome shotgun sequence (10952 bp)
Overview 1 RT 1: 7678-10946 bp Neighborhood of RT #1 [7678, 10951] RVT-GII RVT-GII GIIM PBP1_GntR Feature: gene Location: 7678-7992 bp Feature: gene Location: 8390-8587 bp Feature: gene Location: 8756-9190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8948-9164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8948-9164 bp Feature: gene Location: 9163-9816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9166-9574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9166-9574 bp Feature: domain Description: GIIM Note: maturase Location: 9622-9814 bp Feature: domain Description: GIIM Note: maturase Location: 962 2 -9814 bp Feature: gene Location: 10192-10410 bp Feature: gene Location: 10541-10951 bp Feature: domain Description: PBP1_GntR Location: 10544-10946 bp Feature: domain Description: PBP1_GntR Location: 10544-10946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PBP1_GntR (cd01575)