myRT

myRT report for GCA_009902145.1_ASM990214v1

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Seq: RPFB01000014.1 Klebsiella pneumoniae strain CL2079 NODE_14_length_151781_cov_52.7378, whole genome shotgun sequence (151781 bp)
Overview 1 RT 1: 112888-119756 bp Neighborhood of RT #1 [112888, 119758] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112888-113616 bp Feature: domain Description: FimC Location: 112936-113599 bp Feature: domain Description: FimC Location: 1 1 2936-1 1 3599 bp Feature: gene Location: 113648-116257 bp Feature: domain Description: FimD Location: 113705-116246 bp Feature: domain Description: FimD Location: 1 1 3705-1 1 6246 bp Feature: gene Location: 116257-118335 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116665-117109 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6665-1 1 71 09 bp Feature: gene Location: 118392-118832 bp Feature: domain Description: Integrase_1 Location: 118398-118614 bp Feature: domain Description: Integrase_1 Location: 1 1 8398-1 1 861 4 bp Feature: gene Location: 119093-119758 bp Feature: domain Description: INT_P4_C Location: 119198-119756 bp Feature: domain Description: INT_P4_C Location: 1 1 91 98-1 1 9756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: RPFB01000050.1 Klebsiella pneumoniae strain CL2079 NODE_50_length_11698_cov_50.4112, whole genome shotgun sequence (11698 bp)
Overview 1 RT 1: 8721-11084 bp Neighborhood of RT #1 [8721, 11476] RVT-GII Feature: gene Location: 8721-9230 bp Feature: gene Location: 9239-10054 bp Feature: gene Location: 9989-11476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10394-11084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10394-11084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPFB01000070.1 Klebsiella pneumoniae strain CL2079 NODE_70_length_1909_cov_236.435, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 59-1906 bp Neighborhood of RT #1 [59, 1906] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII