myRT

myRT report for GCA_009902345.1_ASM990234v1

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Seq: RPER01000040.1 Klebsiella pneumoniae strain CL1538 NODE_40_length_24515_cov_42.9159, whole genome shotgun sequence (24515 bp)
Overview 1 RT 1: 671-6478 bp Neighborhood of RT #1 [671, 7008] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 671-976 bp Feature: gene Location: 1855-4131 bp Feature: domain Description: AAA_15 Location: 1888-2896 bp Feature: domain Description: AAA_1 5 Location: 1 888-2896 bp Feature: gene Location: 4246-5346 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4429-4957 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4429-4957 bp Feature: gene Location: 5599-5835 bp Feature: gene Location: 5905-7008 bp Feature: domain Description: STKc_PknB_like Location: 6037-6478 bp Feature: domain Description: STKc_PknB_like Location: 6037-6478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: RPER01000049.1 Klebsiella pneumoniae strain CL1538 NODE_49_length_13922_cov_36.0339, whole genome shotgun sequence (13922 bp)
Overview 1 RT 1: 7312-10365 bp Neighborhood of RT #1 [7312, 10365] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7312-7734 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: gene Location: 7731-7922 bp Feature: gene Location: 8236-9903 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT_N Location: 82 84-852 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-9214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572 -92 14 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: GIIM Note: maturase Location: 92 65-9499 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: gene Location: 9940-10086 bp Feature: gene Location: 10183-10365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RPER01000085.1 Klebsiella pneumoniae strain CL1538 NODE_89_length_1892_cov_420.981, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII