myRT

myRT report for GCA_009902425.1_ASM990242v1

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Seq: RPEP01000043.1 Klebsiella pneumoniae strain CL1325 NODE_46_length_19857_cov_56.9546, whole genome shotgun sequence (19857 bp)
Overview 1 RT 1: 7312-10752 bp Neighborhood of RT #1 [7312, 10752] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7312-7734 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: domain Description: DUF1 380 Location: 731 5-7609 bp Feature: gene Location: 7731-7922 bp Feature: gene Location: 8236-9903 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-9214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-921 4 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: gene Location: 10183-10365 bp Feature: gene Location: 10477-10752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RPEP01000077.1 Klebsiella pneumoniae strain CL1325 NODE_90_length_2106_cov_1.40728, whole genome shotgun sequence (2106 bp)
Overview 1 RT 1: 1-1318 bp Neighborhood of RT #1 [1, 1959] RT_nLTR_like RVT-CRISPR-like Feature: gene Location: 1-156 bp Feature: gene Location: 169-816 bp Feature: domain Description: RT_nLTR_like Location: 673-799 bp Feature: domain Description: RT_nLTR_like Location: 673-799 bp Feature: gene Location: 826-1959 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 910-1318 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 910-1318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), RVT-CRISPR

Seq: RPEP01000078.1 Klebsiella pneumoniae strain CL1325 NODE_93_length_1892_cov_330.825, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII