myRT

myRT report for GCA_009902805.1_ASM990280v1

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Seq: VCKM01000002.1 Salmonella sp. gx-h1 contig2, whole genome shotgun sequence (755803 bp)
Overview 1 RT 1: 224214-231067 bp 2 RT 2: 708555-711824 bp Neighborhood of RT #1 [224214, 231069] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [708555, 711835] TIR-like RVT-Retrons InsE Feature: gene Location: 224214-224759 bp Feature: gene Location: 224762-226462 bp Feature: domain Description: 5 Location: 225986-226280 bp Feature: domain Description: 5 Location: 225986-226280 bp Feature: gene Location: 227369-228133 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 227492-227945 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 227492-227945 bp Feature: gene Location: 228457-228963 bp Feature: domain Description: PRK10201 Location: 228460-228958 bp Feature: domain Description: PRK1 0201 Location: 228460-228958 bp Feature: gene Location: 229087-231069 bp Feature: domain Description: PRK05658 Location: 229225-231067 bp Feature: domain Description: PRK05658 Location: 229225-231 067 bp Feature: gene Location: 708555-708929 bp Feature: gene Location: 708995-709855 bp Feature: domain Description: TIR-like Location: 709421-709775 bp Feature: domain Description: TIR-like Location: 709421 -709775 bp Feature: gene Location: 709884-710843 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 710064-710586 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71 0064-71 0586 bp Feature: gene Location: 710874-711101 bp Feature: gene Location: 711533-711835 bp Feature: domain Description: InsE Location: 711542-711824 bp Feature: domain Description: InsE Location: 71 1 542-71 1 824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), TIR-like (pfam10137), RVT-Retrons, InsE (COG2963)