myRT

myRT report for GCA_009902885.1_ASM990288v1

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Seq: VCKP01000010.1 Salmonella sp. gx-f5 contig10, whole genome shotgun sequence (104916 bp)
Overview 1 RT 1: 57668-60937 bp Neighborhood of RT #1 [57668, 60948] TIR-like RVT-Retrons InsE Feature: gene Location: 57668-58042 bp Feature: gene Location: 58108-58968 bp Feature: domain Description: TIR-like Location: 58534-58888 bp Feature: domain Description: TIR-like Location: 58534-58888 bp Feature: gene Location: 58997-59956 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59177-59699 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 591 77-59699 bp Feature: gene Location: 59987-60214 bp Feature: gene Location: 60646-60948 bp Feature: domain Description: InsE Location: 60655-60937 bp Feature: domain Description: InsE Location: 60655-60937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR-like (pfam10137), RVT-Retrons, InsE (COG2963)

Seq: VCKP01000971.1 Salmonella sp. gx-f5 contig1319, whole genome shotgun sequence (247 bp)
Overview 1 RT 1: 2-158 bp Neighborhood of RT #1 [2, 244] RVT-UG28 Feature: gene Location: 2-244 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 26-158 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 2 6-158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28

Seq: VCKP01000043.1 Salmonella sp. gx-f5 contig46, whole genome shotgun sequence (471 bp)
Overview 1 RT 1: 179-464 bp Neighborhood of RT #1 [179, 469] RVT-UNC Feature: gene Location: 179-469 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 197-464 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 197-464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-DGRs/RVT-GII/RVT-UG6(RVT-UNC)

Seq: VCKP01000062.1 Salmonella sp. gx-f5 contig68, whole genome shotgun sequence (386 bp)
Overview 1 RT 1: 1-375 bp Neighborhood of RT #1 [1, 383] RVT-GII Feature: gene Location: 1-132 bp Feature: gene Location: 216-383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249-375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 9-375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VCKP01000064.1 Salmonella sp. gx-f5 contig70, whole genome shotgun sequence (380 bp)
Overview 1 RT 1: 1-340 bp Neighborhood of RT #1 [1, 378] RVT-UNC Feature: gene Location: 1-378 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 79-340 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 79-340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-Retrons/RVT-UG26/RVT-DGRs(RVT-UNC)

Seq: VCKP01000749.1 Salmonella sp. gx-f5 contig989, whole genome shotgun sequence (256 bp)
Overview 1 RT 1: 1-133 bp Neighborhood of RT #1 [1, 153] RVT-UG19 Feature: gene Location: 1-153 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 10-133 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 10-133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19