myRT

myRT report for GCA_009905015.1_ASM990501v1

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Seq: WXWB01000074.1 Vibrio sp. V24_P1S3T111 scaffold113_size7440, whole genome shotgun sequence (7440 bp)
Overview 1 RT 1: 97-7439 bp Neighborhood of RT #1 [97, 7438] Lip2 RVT_N RVT-GII GIIM SLATT_5 RVT-UG17 PRK14989 Feature: gene Location: 97-885 bp Feature: domain Description: Lip2 Location: 103-883 bp Feature: domain Description: Lip2 Location: 1 03-883 bp Feature: gene Location: 1303-2775 bp Feature: domain Description: RVT_N Location: 1351-1591 bp Feature: domain Description: RVT_N Location: 1 351 -1 591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639-2266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 639-2266 bp Feature: domain Description: GIIM Note: maturase Location: 2323-2551 bp Feature: domain Description: GIIM Note: maturase Location: 2323-2551 bp Feature: gene Location: 2849-3124 bp Feature: gene Location: 3652-4314 bp Feature: domain Description: SLATT_5 Location: 3661-4258 bp Feature: domain Description: SLATT_5 Location: 3661 -4258 bp Feature: gene Location: 4316-5647 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4544-5147 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4544-51 47 bp Feature: gene Location: 6179-7438 bp Feature: domain Description: PRK14989 Location: 6182-7439 bp Feature: domain Description: PRK1 4989 Location: 61 82-7439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lip2 (COG3675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SLATT_5 (pfam18160), RVT-UG17, PRK14989 (nitrite reductase subunit NirD; Provisional)