myRT

myRT report for GCA_009907005.1_ASM990700v1

Download annotations/find similar RTs

Seq: JAAATD010000114.1 Klebsiella pneumoniae strain 2471 2471_contig114, whole genome shotgun sequence (1278 bp)
Overview 1 RT 1: 92-1031 bp Neighborhood of RT #1 [92, 1276] RVT-GII GIIM Feature: gene Location: 92-1276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-758 bp Feature: domain Description: GIIM Note: maturase Location: 833-1031 bp Feature: domain Description: GIIM Note: maturase Location: 833-1 031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAATD010000004.1 Klebsiella pneumoniae strain 2471 2471_contig4, whole genome shotgun sequence (146550 bp)
Overview 1 RT 1: 32168-39021 bp Neighborhood of RT #1 [32168, 39038] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32168-32833 bp Feature: domain Description: INT_P4_C Location: 32273-32831 bp Feature: domain Description: INT_P4_C Location: 32 2 73-32 831 bp Feature: gene Location: 33094-33534 bp Feature: domain Description: Integrase_1 Location: 33100-33316 bp Feature: domain Description: Integrase_1 Location: 33100-33316 bp Feature: gene Location: 33591-35669 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33999-34443 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33999-34443 bp Feature: gene Location: 35669-38278 bp Feature: domain Description: FimD Location: 35726-38267 bp Feature: domain Description: FimD Location: 3572 6-382 67 bp Feature: gene Location: 38310-39038 bp Feature: domain Description: FimC Location: 38358-39021 bp Feature: domain Description: FimC Location: 38358-3902 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAATD010000080.1 Klebsiella pneumoniae strain 2471 2471_contig80, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII